Pairwise Alignments

Query, 389 a.a., Protein of unknown function DUF140 (NCBI) from Rhodospirillum rubrum S1H

Subject, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 6/252 (2%)

Query: 129 VARVGHGTLGFGAELGAIATLVGESVFGVARGLGGRAFTRSVDILHLMREAGANALVIVA 188
           V+ VG  TL      G  + ++  ++ G  + +  R F   V  L+ +   G  +L I+ 
Sbjct: 4   VSSVGQRTLAVSETFGRASLMLFGALVGRPQPI--RHFPLLVRQLYSI---GVQSLAIII 58

Query: 189 IVNGLIGAILAFVGAVQLQRFGAGIFVADLVGIAMVREMAAVMTAIVMAGRTGGAYAAHL 248
           +    IG +L+  G V L  +GA   +  +V ++++RE+  V+TA++ AGR G A  A +
Sbjct: 59  VSGLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEI 118

Query: 249 ATMQGNEEIDALKVLGIPAYDFLVLPRVVALVTMMPLLYLYGCAIGLLGGFVVSLAILDM 308
             M+  E++ +L+++ +     ++ PR  A V  MPLL +   A+G+ GG +V +    +
Sbjct: 119 GLMKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGI 178

Query: 309 SATTFLDQIQGAI-AGRQFAIGLVKSVAFGFLVALAGCHIGLRAGRSAADVGRAATSAVV 367
              +F   +Q ++  G+      +K V F F V       G  A  ++  + RA T  VV
Sbjct: 179 DHGSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVV 238

Query: 368 VGIVGVIALDAV 379
              + V+ LD V
Sbjct: 239 HSSLAVLGLDFV 250