Pairwise Alignments

Query, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  509 bits (1310), Expect = e-148
 Identities = 290/700 (41%), Positives = 408/700 (58%), Gaps = 10/700 (1%)

Query: 605  LARADGLIADH---RRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIVG 661
            LA    L  +H   R+ Q  L   E R+    E    GI H D + H    N +  +I+G
Sbjct: 180  LANLVSLALEHAALRQSQAQLHSLEERYLRLLEFCPTGIIHYDTELHITYSNQQFANIIG 239

Query: 662  YPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSL 721
             P + L  L   D+    D R  L  + A+L G+   +  E R    +G  LW++L  + 
Sbjct: 240  VPLERLQDL---DMAKLQDQRP-LPALAAVLEGRTGRFEGEYR-ASLSGRQLWVSLVAAP 294

Query: 722  VRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQ 781
            V D        I++VE+   RK AELQL   S     S   I +TD  G I  VNP F++
Sbjct: 295  VLDQGGQLLGGIAIVEDATERKRAELQLRQLSRAVEQSPATIVITDTNGVIEYVNPKFTR 354

Query: 782  ITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSI 841
             T Y A E +G    +L+SG    E Y  LW  + + G W G   NRRR+GE++ E  +I
Sbjct: 355  TTGYSAEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFHNRRRNGELYWEHATI 414

Query: 842  SSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERAR 901
            S + +    +T+++ +  D++  +  E + H LA+ D LTGLPNR LL  R+   +  A 
Sbjct: 415  SPITDDNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQCLAAAE 474

Query: 902  RTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAV 961
            R     A+LF+DLD FK +NDSLGH  GD LL+++  RL  C+ D+ T++RLGGDEFV V
Sbjct: 475  REQETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGDEFVVV 534

Query: 962  IEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADT 1021
            + D   +     +A  +++R+ +P  + +G ++ +  S+GISLFP D  +  +LL++ADT
Sbjct: 535  LADAQ-LDGASQVARKIIDRVGQPFVI-DGHQLTVTPSIGISLFPHDARDFQSLLKNADT 592

Query: 1022 ALGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEG 1081
            A+ Q K +G  AY F+T  +      RL LE  LR A+E+ +F+LHYQP + +G+G V G
Sbjct: 593  AMYQAKESGRNAYQFFTAEMNVLAFERLVLENALRQAVERQEFVLHYQPQVDMGSGRVIG 652

Query: 1082 VEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAV 1141
             EALVRW   +  ++PP RFIP+AED+GLI  +G+WVL EACR  + W+  G+P   +AV
Sbjct: 653  AEALVRWLHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGLPAIPVAV 712

Query: 1142 NLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRL 1201
            NLS  Q R   +   V  +L +TGL +  LELE+TE  +ME   A    +  L  +GV L
Sbjct: 713  NLSAVQLRQSELHESVAELLRRTGLESRYLELELTERTVMEDAEATVRCLRRLDEMGVML 772

Query: 1202 AIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAE 1261
            +IDDFGTGYSSL+ L+RFPIDK+KIDQSFVRDI  DA  + I   II+MG +L+L V+AE
Sbjct: 773  SIDDFGTGYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQAIAVAIISMGHSLRLRVIAE 832

Query: 1262 GVETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWLALR 1301
            GVET +QL+ L R  CD AQG+ F RP+ A     +LA R
Sbjct: 833  GVETAEQLEILHRHGCDEAQGFHFGRPMPADEFAAYLARR 872