Pairwise Alignments

Query, 315 a.a., RuBisCO transcriptional regulator cbbR, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 328 a.a., LysR family transcriptional regulator PA3398 from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (327), Expect = 4e-35
 Identities = 85/277 (30%), Positives = 143/277 (51%), Gaps = 6/277 (2%)

Query: 5   TLRQMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQAG 64
           TLRQ+Q+F AVA+  S S AA +L L+Q A S  I ++E  +   LF++ G+ L L   G
Sbjct: 24  TLRQLQVFVAVAQQESVSRAAGQLNLSQSAASTSITELERQSSCQLFDRAGKRLSLNALG 83

Query: 65  TILLGHVRTILAAVTDADKAMDALKGKRA-GALRIGVVST-AKYFAPRLLSVFTAGYPGV 122
             LL      +A +  A +  D L GK   G+L +G   T   Y A  L+  F   +P  
Sbjct: 84  KQLLPQA---VALLDQAKEIEDLLNGKSGFGSLAVGATLTIGNYLATLLIGGFMQRHPES 140

Query: 123 ELGLTVANREQILGMIQENALDLFIMGRPPTEPAVRAERFAPNPMVMVAASDHPLVRR-K 181
           ++ L V N   I+  +    +DL ++    + P +  + +  + +V+  A  HPL +R +
Sbjct: 141 QVKLHVQNTANIVHQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRGQ 200

Query: 182 LTFHDLSGETFLMREPGSGTRILMEKLMTDHGVLPHRMIEMSSNETIKQAVMAGMGISLL 241
            T  +L+ E +++RE GSGTR+  ++ M  H    +  +E+   E IK+AV +G+GI  +
Sbjct: 201 ATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCI 260

Query: 242 SRNTMSLELSVGRLVILDVEGLPIQRDWYVVIREGKH 278
           SR  +      G LV ++   + + R +Y +  + K+
Sbjct: 261 SRLALRDAFRRGSLVAVETPDMDLARQFYFIWHKQKY 297