Pairwise Alignments

Query, 315 a.a., RuBisCO transcriptional regulator cbbR, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 304 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (293), Expect = 3e-31
 Identities = 78/289 (26%), Positives = 149/289 (51%), Gaps = 4/289 (1%)

Query: 3   HATLRQMQIFDAVARHLSFSNAARELGLTQPAVSLQIKQIEALAGLPLFEQMGRVLLLTQ 62
           H +L+Q+++F  + +H S + AA  L L++ AVS+ + ++E   G  LF+++   L+L Q
Sbjct: 4   HISLKQLRVFTTITQHKSLTVAAEVLCLSKAAVSVALSELEKQLGHALFDRVNNRLVLNQ 63

Query: 63  AGTILLGHVRTILAAVTDADKAMDALKGKRAGALRIGVVST-AKYFAPRLLSVFTAGYPG 121
            G  LL     +L    D D+ + A +    G LRIG   T     AP L+S F   +P 
Sbjct: 64  EGQKLLPMADELLQRAKDIDR-LFAEQQVLTGKLRIGSSDTIGNQVAPYLISAFRQLHPH 122

Query: 122 VELGLTVANREQILGMIQENALDLFIMGRPPTEPAVRAERFAPNPMVMVAASDHPLVRR- 180
               L ++N  Q+   + +  LD+ ++      P + + +F+ + M ++ A DHPL ++ 
Sbjct: 123 PSQSLFISNSAQVCQKLVDYELDIGLIEGKTLHPELISTQFSQDEMCIICAPDHPLAQQE 182

Query: 181 KLTFHDLSGETFLMREPGSGTRILMEKLMTDHGVLPHRMIEMSSNETIKQAVMAGMGISL 240
           +L   D     +++RE GSG+R    +++           E+++ E +  +V +G+G+  
Sbjct: 183 RLVMSDFEHSDWVLREAGSGSREFFLRVIAPRIEHWIEAFELNTTEALINSVSSGLGLGC 242

Query: 241 LSRNTMSLELSVGRLVILDVEGLPIQRDWYVVIREGKHLLPVAEAMVAF 289
           LSR         GR+VIL++  L ++R +++++ + K+  P+    + F
Sbjct: 243 LSRLAAKTPQQDGRVVILNIP-LDMKRRFWMLVHKEKYQNPLLRQFIEF 290