Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 182 a.a., RNA polymerase sigma70 from Azospirillum brasilense Sp245

 Score = 75.9 bits (185), Expect = 4e-19
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 12/172 (6%)

Query: 10  LFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLY 69
           ++L HRR+L   A  IV D   AED++QE++LR   A       E G    ++    +L+
Sbjct: 8   IYLDHRRSLFGCAMKIVRDLQVAEDLLQESYLRACKA------VERG---PIDNIGAFLH 58

Query: 70  KIVRNLAVDLSRRLKREAWMGDGGASLD---GVAAGAPSPEQEAIGRDDLRAVAQALASL 126
           + V NLA+D  RR + +     G A      G+A+  PS E+  + R+ L     AL  L
Sbjct: 59  RTVHNLALDHLRRCRTQERFEAGPADTVEALGIASETPSAEERLLHRERLSCFMDALDRL 118

Query: 127 PPRTRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLDHLDRSSK 178
           P R R  + L+R E  ++ +I   LG+SQ    + +  A+ H +D + R  +
Sbjct: 119 PARARQVWLLNRVEGLSYPQIAAHLGVSQGTVFNDMKLAMGHFVDTMARRDR 170