Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 177 a.a., RNA polymerase sigma70 from Azospirillum brasilense Sp245

 Score = 96.3 bits (238), Expect = 3e-25
 Identities = 65/171 (38%), Positives = 91/171 (53%), Gaps = 14/171 (8%)

Query: 9   DLFLRHRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYL 68
           D+F  HRR+LI  A  I G    AEDVVQ+A+L+   A     ST + R  A     GYL
Sbjct: 14  DVFTTHRRSLIGVAERITGCRHHAEDVVQDAFLKLLGAE----STSSIRAKA-----GYL 64

Query: 69  YKIVRNLAVDLSRRLKREAWMGDGGASLDGVAAGAP---SPEQEAIGRDDLRAVAQALAS 125
             +VRNLA+D  RR   E+ +       +G A   P   SPE   + R  L+ +  ALA 
Sbjct: 65  MMVVRNLAIDHYRRKGLESRLM--ATEEEGQAVSTPEAASPESVNVNRQLLQTLESALAD 122

Query: 126 LPPRTRTAFDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLDHLDRS 176
           LP RTR AF++HR    +  +I + LG+S T  + ++ +AL HC   + R+
Sbjct: 123 LPERTRYAFEMHRIHGHSQKDIAETLGVSPTLVNVMIRDALIHCRKAMKRA 173