Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 188 a.a., RNA polymerase sigma factor from Rhodopseudomonas palustris CGA009

 Score = 68.2 bits (165), Expect = 8e-17
 Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 13/132 (9%)

Query: 32  AEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYKIVRNLAVDLSRRLKREAWMGD 91
           A D+VQEA+LR   A                    YL++   NLA+D +RR +R   +  
Sbjct: 45  AADIVQEAFLRLLRAPREEVRDLRS----------YLFRTTDNLAIDEARRRRRNI-LAT 93

Query: 92  GGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPRTRTAFDLHRFENCTFAEIGQRL 151
                + +A  +P P+   I   + RA+  ALA+LPPR R    LH+FE  ++A+I +RL
Sbjct: 94  AVELDEAIADPSPLPDAVLISHQEFRALHAALAALPPRPREVLILHKFEGMSYADIAERL 153

Query: 152 GISQ--TRAHSL 161
           GIS+    AH L
Sbjct: 154 GISKNTVMAHML 165