Pairwise Alignments

Query, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 183 a.a., sigma-70 family RNA polymerase sigma factor from Dyella japonica UNC79MFTsu3.2

 Score = 70.5 bits (171), Expect = 2e-17
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 11/162 (6%)

Query: 14  HRRALIDYATPIVGDSMRAEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYKIVR 73
           H RAL+ +    +     A++V QEA++R  + +  P S +  R         YL++   
Sbjct: 29  HHRALLAFLQCRLQSPSDAQEVAQEAYVRMLTLA-RPDSVDDLRA--------YLFRTAS 79

Query: 74  NLAVDLSRRLKREAWMGDGGASLDGVAAGAPSPEQEAIGRDDLRAVAQALASLPPRTRTA 133
           NLA+D  R+    A   D  A  +  A  AP+PE+ A+  + L  + QAL  LPP+TR A
Sbjct: 80  NLAMDRLRQRGIHARAVDEVAIRE--AQTAPAPERRAMAVERLHGLKQALGELPPKTREA 137

Query: 134 FDLHRFENCTFAEIGQRLGISQTRAHSLVHEALAHCLDHLDR 175
           F  H  E   F  + + + +S+      V  ALAHC   +D+
Sbjct: 138 FMAHMVEGLDFGAVARAMKLSERMVRYHVTRALAHCRARVDQ 179