Pairwise Alignments

Query, 306 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

Subject, 310 a.a., Periplasmic solute binding protein from Pseudomonas syringae pv. syringae B728a

 Score =  386 bits (991), Expect = e-112
 Identities = 203/305 (66%), Positives = 241/305 (79%), Gaps = 5/305 (1%)

Query: 3   RRRFLSLAAATAGSAALPARSVFAAD---RPRIGVTLHPYYSYVAHIVGEAAEVVPIIPA 59
           +RR L     T    AL A S FAA+   R RIG+TLHPYYSYV++IVG+ A+VVP+IPA
Sbjct: 6   KRRPLLRVLLTGLMVALLAPSGFAAEPAKRLRIGITLHPYYSYVSNIVGDKADVVPLIPA 65

Query: 60  GFNPHAYEPRPEDIRRIGTLDVLVVNGIGHDDFAGRMVAASERPDLPLIEANAEVPLLAA 119
           GFNPHAYEPR EDI+RIG+LDV+V+NG+GHDDFA RM+AASE P++  IEANA+VPLLAA
Sbjct: 66  GFNPHAYEPRAEDIKRIGSLDVIVLNGVGHDDFADRMIAASETPNIKTIEANADVPLLAA 125

Query: 120 SGANARTGAAGKVVNPHTFLSITGSIQQVYTIARALGERVPDRAEVFNANARAYAKRLRG 179
           +G  AR   AGKVVNPHTFLSI+ SI QV  IAR LG+  PD A+ + ANARAY KRLR 
Sbjct: 126 TGVAAR--GAGKVVNPHTFLSISASIAQVNNIARELGKLDPDNAKTYTANARAYGKRLRQ 183

Query: 180 LRAAALAKLAGAPEVGLRVATIHDAYNYLLREFGLEVAAVVEPAHGIEPSPAQLAETIAT 239
           +RA ALAKL  AP   LRVAT+H AY+YLLREFGLEV AVVEPAHGIEPSP+QL +TI  
Sbjct: 184 MRADALAKLTKAPNADLRVATVHAAYDYLLREFGLEVTAVVEPAHGIEPSPSQLKKTIDQ 243

Query: 240 LRRLDVQVIFSELNFPSPYVETIRRETGIALYAFSHISTGAYTASLFEEETGRNLDTLVR 299
           LR LDV+VIFSE++FPS YVETI+RE+G+ LY  SHIS G YTA  +E+E   NLDT+VR
Sbjct: 244 LRELDVKVIFSEMDFPSTYVETIQRESGVRLYPLSHISYGEYTADKYEKEMAGNLDTVVR 303

Query: 300 AMLEA 304
           A+ E+
Sbjct: 304 AIQES 308