Pairwise Alignments

Query, 306 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

Subject, 344 a.a., periplasmic solute binding protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 19/274 (6%)

Query: 9   LAAATAGSAALPARSVFAADRPRIGVTLHPYYSYVAHIVGEAAEVVPIIPAGFNPHAYEP 68
           L AA    A  PA +  A    ++ V++ P   ++  I G+ AEV  ++P G +PH YEP
Sbjct: 47  LLAAPGSPAVAPASAAAAV---QVAVSILPQKYFIQRIAGDLAEVTVMVPPGADPHTYEP 103

Query: 69  RPEDIRRIGTLDVLVVNGIGHD-DFAGRMVAASERPDLPLIEANAEVPLLAASGANARTG 127
           +P  +R + +  + +  G+  +  +  R++AA  + D+ ++     + LL         G
Sbjct: 104 KPSQMRGLASAKLYMTIGVPFEKSWLDRIMAAGGK-DMTVVRMEKGIDLLPQDEHVLDEG 162

Query: 128 AAGKVV----------NPHTFLSITGSIQQVYTIARALGERVPDRAEVFNANARAYAKRL 177
             G+            +PH +LS         +I  AL +     A V+ AN  A+ + L
Sbjct: 163 HEGEAADAHHHDHEGGDPHIWLSPALVKMMAGSIKAALVKADSAHAAVYRANHDAFVREL 222

Query: 178 RGLRAAALAKLAGAPEVGLRVATIHDAYNYLLREFGL-EVAAVVEPAHGIEPSPAQLAET 236
             L           PE   R    H A++Y    + L EVA  VE   G EP P QL   
Sbjct: 223 DELDLHINGLFENVPENRRRFMVFHPAWSYFAHNYNLREVAIEVE---GREPGPRQLTRI 279

Query: 237 IATLRRLDVQVIFSELNFPSPYVETIRRETGIAL 270
           +   ++  ++ +F +  F     ETI R  G  L
Sbjct: 280 VEFAKKEKIEALFVQPQFSKRGAETIARNVGAKL 313