Pairwise Alignments

Query, 392 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 245 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  101 bits (252), Expect = 2e-26
 Identities = 72/215 (33%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 167 NRADAFWREARTHLALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIAL 226
           N+   FW     HL     A   A  V + L ++  R A        G   +    S+  
Sbjct: 43  NQGSLFWLTV-LHLRTVFVATVAATIVAVSLAIIVTRKA--------GAEFLPLSRSLVN 93

Query: 227 FGILMAPLGWLAAHVPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVD 286
            G    P+  LA  VP      + G G  P L+AL LY LLP+  N + GL  +P   ++
Sbjct: 94  IGQTFPPVAVLALAVP------IYGFGEKPTLIALFLYGLLPIFENALTGLTTLPPTVME 147

Query: 287 AARGMGM-GRGRLLREVELPLALPVILTGVRIVLVQAIGLTTVAALIGGGGFGTFVFQGV 345
           AARG GM GR RL R +ELPLALPVILTG+R+ +V ++   T+ + +     G  +  G+
Sbjct: 148 AARGAGMTGRQRLFR-IELPLALPVILTGIRLSVVISLATATIGSTVAARTLGEVIIAGL 206

Query: 346 GQAAMDLVLLGALPTVALAFGAAVILDALIEGARR 380
               +  VL G L   AL    AV++   ++G  R
Sbjct: 207 QSNNLAFVLQGGLIVGAL----AVLIHDALQGLER 237