Pairwise Alignments

Query, 392 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 399 a.a., choline uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  414 bits (1063), Expect = e-120
 Identities = 225/378 (59%), Positives = 270/378 (71%), Gaps = 4/378 (1%)

Query: 1   MGISLDRPGIIVALVL--GAALAGPPFMTLRANRIASGKGVALFDALPWGAAAGIVALAV 58
           +    D+ G+I+A+++  GA LA  PF T RANRI  G+  A+ +ALP     G++AL V
Sbjct: 12  LAFRFDKLGLIIAILVLYGALLA--PFATFRANRIIQGEARAILEALPPPLGYGLLALVV 69

Query: 59  IVGGVALLARRPLARLGAAVIGGGVGMLAVGWAAEGLTQAGNPYARIAPAGGFWLLVLAC 118
              GVA L    L R+  A+       L +G AA+ LT   N +AR++PA GFW+LV A 
Sbjct: 70  AGAGVAFLRTPRLLRMAVALAALAALALLIGVAADHLTPPDNSFARVSPASGFWVLVFAF 129

Query: 119 LLLGTDALVRLRPGPLARLLALGALFGALGLLLASGQWDGVSVLKEYANRADAFWREART 178
            LL  DAL RL PGP  RLL    +    G +L +G+WD +S++KEYANRAD FW EA  
Sbjct: 130 SLLLADALTRLNPGPGLRLLVFAGVLVLAGGMLVTGRWDDLSIVKEYANRADLFWTEAGR 189

Query: 179 HLALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGILMAPLGWLA 238
           H+ LALG++A A  VGLPLG+LCHRV  LR  VL  L  IQTIPSIALFGIL+APLGW+A
Sbjct: 190 HVTLALGSLAAATIVGLPLGILCHRVERLRAGVLNVLNAIQTIPSIALFGILIAPLGWIA 249

Query: 239 AHVPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMGMGRGRL 298
           A+VP  AA+G+RGIGA PA VAL LY+LLPVVANTVVGLA VP A  DAARG+GM   + 
Sbjct: 250 ANVPGAAAIGIRGIGAAPAFVALFLYSLLPVVANTVVGLAGVPHAANDAARGIGMTDRQR 309

Query: 299 LREVELPLALPVILTGVRIVLVQAIGLTTVAALIGGGGFGTFVFQGVGQAAMDLVLLGAL 358
           L  +E PLA PVILTG+RIVLVQ IGL T+AALIGGGGFG FVFQGVGQ AMDLVLLGA+
Sbjct: 310 LVAIEFPLAFPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGVGQTAMDLVLLGAI 369

Query: 359 PTVALAFGAAVILDALIE 376
           PTV LAF AA++LDALIE
Sbjct: 370 PTVVLAFTAAIVLDALIE 387