Pairwise Alignments

Query, 392 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 16/192 (8%)

Query: 173 WREARTHLALALGAVAVACAVGLPLGVLCHRVAWLRGMVLQGLTIIQTIPSIALFGILMA 232
           W  +   L+L + +  +A  +G+PLG++  R   +  ++   L ++QT+PS+A       
Sbjct: 87  WDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAYL----- 141

Query: 233 PLGWLAAHVPAIAALGVRGIGATPALVALILYALLPVVANTVVGLAQVPAATVDAARGMG 292
                   +PA+   G   IG  P ++A +++A+ P +  T +G+ QV    ++  R  G
Sbjct: 142 --------IPAVLFFG---IGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFG 190

Query: 293 MGRGRLLREVELPLALPVILTGVRIVLVQAIGLTTVAALIGGGGFGTFVFQGVGQAAMDL 352
               ++L ++ELP A+P I+ GV   ++ +  +  +A  IG GG G  +  G+ + ++  
Sbjct: 191 GTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAP 250

Query: 353 VLLGALPTVALA 364
            L   +    LA
Sbjct: 251 ALEAGIAVTFLA 262