Pairwise Alignments

Query, 174 a.a., transcriptional regulator with PAS/PAC domain (NCBI) from Rhodospirillum rubrum S1H

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  106 bits (265), Expect = 6e-28
 Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 2/135 (1%)

Query: 7   TPSGVERFF-GEDQIIVSKTDLKGIITYANDVFLKVAGYKEAEILGKPHNIIRHPDMPAC 65
           TPS  +    G+   +VS TDLKG+ITY ND F ++AG++  E+LGK HNI+RH  MP  
Sbjct: 21  TPSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKA 80

Query: 66  VFKLLWDRIPAGHEVFAYVINMAKNGDHYWVYAHITPTFSASGQVIGYHSSRRVPEARIL 125
            F  +W  +  GH     V N  K+G  YWV A++TP +   GQ+ GY S R   E + +
Sbjct: 81  AFADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQ-QGQLTGYQSVRVKAERKWV 139

Query: 126 PGIKDLYAALLDEER 140
                 Y ALL  E+
Sbjct: 140 EIATKAYQALLAAEK 154