Pairwise Alignments

Query, 860 a.a., ATP-dependent helicase HrpB (NCBI) from Rhodospirillum rubrum S1H

Subject, 820 a.a., ATP-dependent helicase HrpB from Vibrio cholerae E7946 ATCC 55056

 Score =  592 bits (1526), Expect = e-173
 Identities = 358/836 (42%), Positives = 487/836 (58%), Gaps = 26/836 (3%)

Query: 24  PLPIDPVLPALLEALASHGRAVLIAPPGAGKTTRVPPALLGALWLGGQKVVMLEPRRLAT 83
           PLPI  V+P LL  + +  + +L A PGAGK+T  P  LL A    G K++MLEPRRLA 
Sbjct: 3   PLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHG-KIIMLEPRRLAA 61

Query: 84  RAAARRMAFEAGEAVGQRFGFRVRGESRSGPLTRVEVMTEGILTRRIQDDPELAGVGCVI 143
           R  AR +A + GE VGQR G+RVRGE+R    T++E++TEGI+TR +Q+DPEL GV  +I
Sbjct: 62  RNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLI 121

Query: 144 LDEFHERGLQGDLAFALLREIQGALRPDLRLLVMSATLDGAAIAALMDDAPVIESHGRAF 203
            DEFHER +  D A AL  E+Q ALR DL+++VMSATLD  A+  L+  A  +ES GR F
Sbjct: 122 FDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQGRGF 181

Query: 204 PVTITHGERPAARDLGPAMARTILRALEDEPGSVLAFLPGEREIAAVAGALARALPADTV 263
           P+ I +    +   L  AM R I   L+ E GS+LAFLPG   I  +   L+  L ++  
Sbjct: 182 PIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLS-DLASEVE 240

Query: 264 LRPLYGALPPAEQDAAISPCPPGQRKVVLATDIAETSLTIEGVRIVVDSGLRRSPRFDPQ 323
           + PLYG +  A Q  AI+P   G+RKVVLAT+IAETSLTIEG+RIV+DSGL RS RFD +
Sbjct: 241 ICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLK 300

Query: 324 TGLSRLDTVRISQAGAEQRRGRAGRLEPGVCLRLWPEAEHRALPAQETPEILAADLAPLA 383
           TG++RL+ VRI+Q+ AEQR GRAGRLEPG+C+RL+ EA+ +  P    PE+L  DLAPLA
Sbjct: 301 TGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLA 360

Query: 384 LELARWGARDAAALCWPTPPPPGPLAQARDLLTSLGALEPAGGLSAHGAAMAALPLHPRL 443
           LELA+WGA+  + L W   PP    AQA+ LL  LG L+    ++A G     L + PR+
Sbjct: 361 LELAQWGAQ-PSDLAWLNLPPSSAFAQAQQLLQRLGLLDARTQITAAGKEAHLLGVEPRI 419

Query: 444 AHMVLAAKADGADDGALACLLAALLAERDILRPGPGAARDRDLTTRLEILIGQGRRAPAG 503
           A M+L+A   G      A  L  LL E +           + +  +  +   Q  R P  
Sbjct: 420 AAMLLSADRLGESALQSALALTVLLEEPE----------RQVIDVQHSLHRWQQGRHPKQ 469

Query: 504 QIL--RQPTLGAVRDEAARLRQLAGIAASASPEPARCGRVLARAYPDRIAQARPGQPGRF 561
           ++L  R  +L    D A  L         +S + A    V   A+PDRIAQ R  Q G+F
Sbjct: 470 KLLIQRAQSLAHKLDTAFSL---------SSVDSAWLPLVACLAFPDRIAQQRGQQTGQF 520

Query: 562 LLSSGRGALIDVGDPLAAAAFLAVAE-VDGAGSEARVFLAAPLDRADLEELFDEALRPCE 620
           LL++G GA + V D L+AA +L   + + G    +++F A  LD   LE +    +   E
Sbjct: 521 LLANGHGAWLAVEDRLSAADYLVALDLMRGQTQASQIFSALELDIHALERVLPALISRVE 580

Query: 621 TVTWDPRAEAVVARVERRLGALVFESRDLPDRADPARTTPAVCAGIRRLGLGCLPWTRET 680
            V WD +A  + A  + R+  LV     LP+  D  + T A+ + +RR GL  L W+ + 
Sbjct: 581 QVDWDEKAGRLSAEAQWRIDQLVLRREKLPE-PDKQKMTQALLSYVRRKGLTVLQWSEDA 639

Query: 681 DRLRARVAFLHRVHSADDWPDLSDDALLASLADWLGPWLDGITRRSAFARIDLMAALKAL 740
               AR          + WP L D+ LLA L  WL P+L G+T       + ++ ALK  
Sbjct: 640 SEWLARARCAAEWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHY 699

Query: 741 IGWRRLADLDRLAPAQMDVPSGVKVALDYEVPDGPVLAARVQQLFGLTRTPAVLDGGHPV 800
           +GW     LD   P    +P+G    + Y++   P L+ R+Q++FG   +P V  G   V
Sbjct: 700 LGWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSPRVAKGTRAV 759

Query: 801 LVHLLSPAGRPLQVTRDLAGFWKGSYAEVRKDMRGRYPKHPWPEDPTGAEATNRVK 856
           ++ LLSPA RPLQVTRDLA FW G+Y EV+K+M+GRYPKH WP+DP    AT++ K
Sbjct: 760 VMELLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHVWPDDPANHVATSKTK 815