Pairwise Alignments

Query, 860 a.a., ATP-dependent helicase HrpB (NCBI) from Rhodospirillum rubrum S1H

Subject, 820 a.a., ATP-dependent helicase from Sinorhizobium meliloti 1021

 Score =  691 bits (1783), Expect = 0.0
 Identities = 392/835 (46%), Positives = 512/835 (61%), Gaps = 22/835 (2%)

Query: 25  LPIDPVLPALLEALASHGRAVLIAPPGAGKTTRVPPALLGALWLGGQKVVMLEPRRLATR 84
           LPI  +LP L +ALAS G  VL APPGAGKTT VP  LL   W G  K+++LEPRRLA R
Sbjct: 7   LPIREILPGLGDALASAGSVVLSAPPGAGKTTLVPLFLLDQPWRGDGKIILLEPRRLAAR 66

Query: 85  AAARRMAFEAGEAVGQRFGFRVRGESRSGPLTRVEVMTEGILTRRIQDDPELAGVGCVIL 144
           AAA RMA   GE VG+  G+R+R ++R    TR+EV+TEG+ +R I DDPEL+GV  V+ 
Sbjct: 67  AAAGRMAELLGEKVGETVGYRMRLDNRVSGKTRIEVVTEGVFSRMILDDPELSGVSAVLF 126

Query: 145 DEFHERGLQGDLAFALLREIQGALRPDLRLLVMSATLDGAAIAALMDDAPVIESHGRAFP 204
           DEFHER L  D   AL  ++Q ALR DLR++VMSATLD   IA L+ DAPV++S GR+FP
Sbjct: 127 DEFHERSLDADFGLALALDVQSALREDLRIVVMSATLDVERIAGLVGDAPVLKSEGRSFP 186

Query: 205 VTITHGERPAARDLGPAMARTILRALEDEPGSVLAFLPGEREIAAVAGALARALPADTVL 264
           + I +  R A   +  AM RTI  A   E GS+LAFLPG+ EIA  A  LA      T +
Sbjct: 187 IDIRYENRAAGESVEDAMVRTIAEAHRSEKGSILAFLPGQAEIARTAARLADRFGEATAI 246

Query: 265 RPLYGALPPAEQDAAISPCPPGQRKVVLATDIAETSLTIEGVRIVVDSGLRRSPRFDPQT 324
            PLYG L   EQDAAI P P G RK+VLAT IAETS+TI+GVRIVVDSGL+R P F+  T
Sbjct: 247 VPLYGNLSQKEQDAAIRPAPKGTRKIVLATSIAETSITIDGVRIVVDSGLQRLPVFEAST 306

Query: 325 GLSRLDTVRISQAGAEQRRGRAGRLEPGVCLRLWPEAEHRALPAQETPEILAADLAPLAL 384
           G++RL+TVR+S+A A+QR GRAGR EPG+ +RLW   +  AL A   P+ILA+DL+ L L
Sbjct: 307 GITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHSGQTAALAAFTPPQILASDLSGLLL 366

Query: 385 ELARWGARDAAALCWPTPPPPGPLAQARDLLTSLGALEPAGGLSAHGAAMAALPLHPRLA 444
           +LA WG  D + L +  PPP   L +AR LL  LGA++  G L+  G  +  L L  RLA
Sbjct: 367 DLAHWGVADPSTLRFLDPPPETTLREARGLLLELGAIDSRGALTPRGRRIRDLALPVRLA 426

Query: 445 HMVLAAKADGADDGALACLLAALLAERDILRPGPGAARDRDLTTRLEILIGQGRRAPAGQ 504
            M +AA  +G      ACLLA +L E+ +           D+  RL     +        
Sbjct: 427 AMAVAAAEEGR--AQEACLLAVMLTEQGL------GGNGIDIEERLRRFRSE-------- 470

Query: 505 ILRQPTLGAVRDEAARLRQLAGIAASASPEPARCGRVLARAYPDRIAQARPGQPGRFLLS 564
             R     A R  A R+    G + +A P+P   G +L  A+PDRIA  R G+ GRF+++
Sbjct: 471 --RSDRAKAARGLARRMAAELGASKNAGPKPVLPGALLMHAFPDRIALQRGGR-GRFVMA 527

Query: 565 SGRGALIDVGDPLAAAAFLAVAEVDGAGSEARVFLAAPLDRADLEELFDEALRPCETVTW 624
           +GRGA I   + LAAA  L +A++ G     RV  AA +DR+D+E    EA+   E   +
Sbjct: 528 NGRGAEIPETERLAAAGMLVIADLTGRAGAQRVLAAAEIDRSDVEGHMPEAIVTEEQSFF 587

Query: 625 DPRAEAVVARVERRLGALVFESRDLPDRADPARTTPAVCAGIRRLGLGCLPWTRETDRLR 684
           D  +  V AR   RLGA++FE + LP R        A+  GIR+LGL  +P+ ++ ++LR
Sbjct: 588 DRASRQVRARRVTRLGAIIFEEKPLP-RPSGEAAARALADGIRQLGLAAVPFPKDVEQLR 646

Query: 685 ARVAFLHRVHSADDWPDLSDDALLASLADWLGPWLDGITRRSAFARIDLMAALKALIGWR 744
            R+ FLHR    + WPD+SD  L++ L +W  P+  G          DL   L +L+ + 
Sbjct: 647 DRIGFLHR-SIGEPWPDMSDTGLISRLDEWFVPFQGGAGGIDGIKGRDLAEGLMSLVPYE 705

Query: 745 RLADLDRLAPAQMDVPSGVKVALDYEVPDGPVLAARVQQLFGLTRTPAVLDGGHPVLVHL 804
              DL RLAP   + P+G +  + Y+  D P+L+ RVQ+LFGL   PA+ DG  P+L+ L
Sbjct: 706 LQRDLARLAPTHFEAPTGQRHPIHYD-GDEPLLSIRVQELFGLKTHPAIGDGRLPLLLEL 764

Query: 805 LSPAGRPLQVTRDLAGFWKGSYAEVRKDMRGRYPKHPWPEDPTGAEATNRVKPRG 859
           +SP  RP+Q TRDL GFW GS+ +VR +MRGRYPKHPWPEDP  A  T R KPRG
Sbjct: 765 ISPGHRPIQTTRDLPGFWAGSWKDVRAEMRGRYPKHPWPEDPANAMPTTRAKPRG 819