Pairwise Alignments

Query, 109 a.a., Hemimethylated DNA-binding region (NCBI) from Rhodospirillum rubrum S1H

Subject, 109 a.a., hemimethylated DNA-binding protein yccV from Caulobacter crescentus NA1000

 Score =  149 bits (375), Expect = 1e-41
 Identities = 68/108 (62%), Positives = 87/108 (80%), Gaps = 3/108 (2%)

Query: 1   MAMRVAKYRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYDAIPEDIRPARDQPFYHLLAE 60
           M  R+AK+ IGQVVRHR++PFRGV+FDVDPVF NTEEW+ +IPEDIRP +DQPFYHLLAE
Sbjct: 1   MNSRLAKFAIGQVVRHRIFPFRGVVFDVDPVFANTEEWWQSIPEDIRPTKDQPFYHLLAE 60

Query: 61  NGESTYTAYVSEQNLLAEDNPRPVQHPELAEMFDARKDGVYISRTLRP 108
           N +++Y AYVSEQNLL +D+  P+ HP+ A +F++   G+Y    LRP
Sbjct: 61  NEDNSYVAYVSEQNLLPDDSGEPIGHPQTAVIFESFDHGLY---KLRP 105