Pairwise Alignments

Query, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

 Score =  225 bits (574), Expect = 9e-64
 Identities = 117/280 (41%), Positives = 170/280 (60%), Gaps = 1/280 (0%)

Query: 41  PHPLAEFWHYFSENKGAVAGLIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGG 100
           P     FW  F  N  A+ GL  ++ I +V + +P +AP+ P +M+  +  +PP+W   G
Sbjct: 13  PTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDP-QMHSSVLLLPPSWEPEG 71

Query: 101 QWSYLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIM 160
              Y LGTD LGRDILSR+I G+  S+    ++  ++ + G  +G LAG  +G +   + 
Sbjct: 72  TVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLN 131

Query: 161 RLMDIILSVPSLLLAIAIVAILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTA 220
            ++D ++S+PSLLLAI  VA LG G  N + AI + ++P + R    AV  E  KDYV A
Sbjct: 132 HILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMA 191

Query: 221 SRVAGASKGRLMVKTILPNTLAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTML 280
           +R+ GA++  L+  +I PN L  ++ + T+  S AILD  ALGFLGLGA+ P  EWG ML
Sbjct: 192 ARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAML 251

Query: 281 SEAREFVLSHWWIVTFPGLAILFTVLAFNLMGDGLRDALD 320
            ++ E +    W VT PGLAI+FTV+  NL+GDG R AL+
Sbjct: 252 GDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291