Pairwise Alignments

Query, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  220 bits (560), Expect = 4e-62
 Identities = 130/324 (40%), Positives = 185/324 (57%), Gaps = 19/324 (5%)

Query: 12  PKTAGGALDAPG-QEAAVALRAEAALALKPPHPLAE------------FWHYFSENKGAV 58
           P   GGA  AP   E A A    A   +K P   ++                F  N  A+
Sbjct: 10  PAVTGGAYAAPATNEQATAPERPAWSNMKAPDARSQQTAAVAITNGRRALKVFLANPNAL 69

Query: 59  AGLIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSR 118
            G  F+ +++ VAL AP + P  P    + M   P  W  G   ++ LGTD+LGRD+L+ 
Sbjct: 70  FGTAFLALVIAVALLAPVLYPGDP----LSMVGKPFLW-PGQHPAFPLGTDSLGRDVLAG 124

Query: 119 IIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLMDIILSVPSLLLAIAI 178
           I+ G+R+SL VG +   L L  GV +G +AG+  GW+D +++RL++I  ++PS +L + +
Sbjct: 125 ILHGSRISLFVGLMATALGLTFGVVVGAIAGYFSGWIDDLLVRLIEIFQTLPSFVLLVVL 184

Query: 179 VAILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILP 238
           VAI+ P       AIAV+  P   RLTRA       KD+V A+R  G   GR++V+ ILP
Sbjct: 185 VAIVQPSATTVTLAIAVISWPTVARLTRAEFRAIREKDFVMAARSLGFGHGRIIVREILP 244

Query: 239 NTLAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPG 298
           N L P+IV +++  +TAIL  +AL F+GLG  P    WG+M+   RE V + W++   PG
Sbjct: 245 NALPPIIVTSSVMVATAILMESALSFMGLG-DPNVVSWGSMIGTGRELVRTAWYLTALPG 303

Query: 299 LAILFTVLAFNLMGDGLRDALDPR 322
           LAI+FTVLA NL+GDGL DAL+PR
Sbjct: 304 LAIVFTVLALNLIGDGLNDALNPR 327