Pairwise Alignments

Query, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 273 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  214 bits (544), Expect = 3e-60
 Identities = 103/260 (39%), Positives = 169/260 (65%), Gaps = 7/260 (2%)

Query: 66  VIVIVALFAPQVAPHHPY-EMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRIIFGAR 124
           ++++  + AP +AP  P  + ++  +++PP        ++  GTD  GRD+ +RI++GA+
Sbjct: 16  LVILAGILAPWIAPFDPVLDADLMNSELPP------DATFWFGTDGQGRDVYTRILYGAQ 69

Query: 125 LSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLMDIILSVPSLLLAIAIVAILGP 184
           +SL VG V   ++ + GV LG+ AG+  GW D ++    +++L++PSL+ A+A++A+LGP
Sbjct: 70  ISLTVGIVSQVINSIIGVTLGMTAGYWGGWWDDLVNGFTNVMLAIPSLIFALAVMAVLGP 129

Query: 185 GLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPNTLAPL 244
           GL + + A+ +       R+ R++ ++  +  YV A++  G    R+M   ILPN + P+
Sbjct: 130 GLPSLLIALGLTNWSWTCRIARSSTLSLKSLGYVQAAQTLGYGDLRIMFTQILPNMMGPI 189

Query: 245 IVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGLAILFT 304
           +V ATLG  +A+L  AAL FLGLG +PP P WG+ML++AR+ +    W+  FPGLAI  +
Sbjct: 190 LVMATLGMGSAVLSEAALSFLGLGIQPPFPSWGSMLTDARQLIQLAPWVAIFPGLAIFLS 249

Query: 305 VLAFNLMGDGLRDALDPRMK 324
           VL FNL+GDGLRD+LDP M+
Sbjct: 250 VLGFNLLGDGLRDSLDPHMR 269