Pairwise Alignments

Query, 862 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  281 bits (718), Expect = 1e-79
 Identities = 145/398 (36%), Positives = 238/398 (59%), Gaps = 12/398 (3%)

Query: 465 ADQRPANRVLKVDQAKIDTLMALIGELVVSKNSLPFLARRAEEVHGSREMGREIKDTFAV 524
           A +      ++VD + +DT+M ++GELV+ +N L  L   + +         E+    A 
Sbjct: 389 AKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRLLSLGLNSND--------EEMSKAVAN 440

Query: 525 VDRLAQEMQAAIMAVRMLPVSEVFERFPRLVRDIARKLGKHIDLVIEGEDTAADKTIVEM 584
           +D +  ++Q A+M  RM P+ +VF RFPR+VRD+AR L K IDL + GE+T  DK +VE 
Sbjct: 441 LDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEA 500

Query: 585 LGDPLLHIIRNSLDHGIESPEEREAAGKPPTARVLVKAFHDSDQVVIEVSDDGRGIDPVK 644
           L DPL+H++RNS+DHGIE P+ER   GK  T +V++ A  + D + + + DDG G+DP K
Sbjct: 501 LADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDK 560

Query: 645 IRAAAVAKGVIEAERAARLSDQEAVNLVFLPGFSTAGQVSDLSGRGVGMDVVVSTMDKAN 704
           +R  AV +G+++ + A RL+++E  NL+F+PGFS+  +++D+SGRGVGMDVV + ++  N
Sbjct: 561 LRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLN 620

Query: 705 GVVSLSSTPGLGTTVRLSLPLSMAVTRVMMVEAGGGMLFGIPMDHIAQTVRIPRKAVRRI 764
           G + + ST G GT + + +PL++A+   +MV   G   F +P+  + +   +  +    +
Sbjct: 621 GSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHP-FALPLASVNEIFHLDLRRTNVV 679

Query: 765 KQSEAFVLRDAIVPLVRLDTLLGLAPPVWFGDESQ-EDAVLVVRVGNALTGLVVDHFREG 823
                 ++R+  +PL  L     LAP        Q    V++V++G+   GLVVD     
Sbjct: 680 DGQLTIIVREKSIPLFYLQN--WLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQ 737

Query: 824 MDIILKPFDGILAGLPGYSGTALLGDGRVLLVLNLKEL 861
            ++++KP D +L G PG SG  +  DG + L+L++ +L
Sbjct: 738 EEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775



 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 1/131 (0%)

Query: 5   LLLRFLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPAFTKLVH 64
           +L  FL EA ++L+  +  L+ LE  P D   LN +FR  HT+KG  G        +  H
Sbjct: 9   ILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETCH 68

Query: 65  AGEDVLSAVRAGQVALTSELVDLLLDTLDQVGAWVDAI-ERSGLLPDGAEGLSLALTTSL 123
             E+V   +R GQ  ++  L+D +L  LD V     A+ ER  L P   E L      S 
Sbjct: 69  GAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHRLSK 128

Query: 124 RATLPREHGAE 134
            A+   +  AE
Sbjct: 129 PASEDEDEAAE 139