Pairwise Alignments

Query, 862 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

Subject, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  380 bits (977), Expect = e-109
 Identities = 191/391 (48%), Positives = 280/391 (71%), Gaps = 5/391 (1%)

Query: 472 RVLKVDQAKIDTLMALIGELVVSKNSLPFLARRAEEVHGSREMGREIKDTFAVVDRLAQE 531
           + LKVDQ K+D LM L+GEL+V+KNS+ +LA RAE   G R++ ++IK   +V+ RLA++
Sbjct: 370 KTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRLAED 429

Query: 532 MQAAIMAVRMLPVSEVFERFPRLVRDIARKLGKHIDLVIEGEDTAADKTIVEMLGDPLLH 591
           +Q+ +M VRM+P++ VF+R+PRL+RDI+RKLGK +DL+IEGEDT ADK+IVE L +PL+H
Sbjct: 430 LQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEPLVH 489

Query: 592 IIRNSLDHGIESPEEREAAGKPPTARVLVKAFHDSDQVVIEVSDDGRGIDPVKIRAAAVA 651
           +IRN+LDHGIESP+ R   GK PT ++ + AF   D V+I++SDDG+G+D  +++  A+ 
Sbjct: 490 LIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALE 549

Query: 652 KGVIEAERAARLSDQEAVNLVFLPGFSTAGQVSDLSGRGVGMDVVVSTMDKANGVVSLSS 711
           +G++EA +  R+S QE ++L+F PGFST  QVSDLSGRGVGMD V + +++  G ++LSS
Sbjct: 550 RGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSS 609

Query: 712 TPGLGTTVRLSLPLSMAVTRVMMVEAGGGMLFGIPMDHIAQTVRIPR-KAVRRIKQSEAF 770
            PG G+ + + LPLSM ++RVMM E      F IP++ + QT++I R K +RR+K  + F
Sbjct: 610 EPGKGSEITMILPLSMTISRVMMFEL-EQQSFAIPIESVIQTLKISRHKDIRRVKNLDTF 668

Query: 771 VLRDAIVPLVRLDTLLGLAPPVWFGDESQEDAVLVVRVGNALTGLVVDHFREGMDIILKP 830
           +LR   VP++ L     +     + D      +LVVRVG+ + GL VD  +EG D+I+KP
Sbjct: 669 ILRGETVPILYLKRAFEMNSAQIYPD---IQPILVVRVGDDVLGLAVDRLQEGQDVIIKP 725

Query: 831 FDGILAGLPGYSGTALLGDGRVLLVLNLKEL 861
            +G LA    Y G A++GDGRVLLVL+ +E+
Sbjct: 726 LEGALATFSIYRGAAIMGDGRVLLVLDTEEV 756



 Score =  125 bits (313), Expect = 1e-32
 Identities = 85/246 (34%), Positives = 121/246 (49%), Gaps = 20/246 (8%)

Query: 4   PLLLRFLSEARDLLQTAASGLLALEKTPGDDAALNEVFRSVHTLKGSVGLFDYPA-FTKL 62
           P++  F+ E+RDL+++AA GLLALE  P D A +NE+FR +HT+KG+ G+ D  A FT+L
Sbjct: 3   PIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQL 62

Query: 63  VHAGEDVLSAVRAGQVALTSELVDLLLDTLDQVGAWVDAIERSGLLPDGAEGLS---LAL 119
            H  ED++  VR G VAL   ++DL+L   DQ   W++ +E+   L   A  +S   +A 
Sbjct: 63  AHRMEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQ 122

Query: 120 TTSLRATLPREHGAEPTSAPEPTEAPVSIDHLALLPEADRLAAFRAALCGAPLLSLDYAP 179
              L    P  H   P  A +   A +SI  L  L   D      A L     L L Y P
Sbjct: 123 LAPLTQAAP-THTPTPAVAAQEETATLSISELTELLGRDCFNDVEALLEHPDALLLIYTP 181

Query: 180 AEDCFFSGEDPVNLFRQIPDLFSLVIEPRTPWQSV------ETVDPYCCLLRLRALCGGN 233
            + CFFSG+DP+   R +          +  W+ V      E  D Y   ++   L    
Sbjct: 182 DKQCFFSGDDPLAWMRSV---------EKVSWRKVVLIPDSEPFDTYQAQMQFLLLTQSA 232

Query: 234 KTAIEQ 239
           K  +EQ
Sbjct: 233 KKDLEQ 238