Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 161 a.a., Positive regulator of CheA protein activity (CheW) from Xanthomonas campestris pv. campestris strain 8004

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 4/142 (2%)

Query: 385 QFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRRRFG 444
           +F++F L  E YGV I  VQEI R  + +TR+P  PD+I+GV+NLRG ++PV+D R +  
Sbjct: 13  EFLSFALGEEHYGVDILKVQEI-RGYDSVTRLPDAPDYIKGVINLRGTIVPVIDLRLKLR 71

Query: 445 LPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLIGPAPVL-SDEQQRLIRRVAN 503
           L     +    ++V  +     G +VDSVS+VI +    I P P   +    R I  +  
Sbjct: 72  LKEARYDAFTVMIVLNVEDRVVGIVVDSVSDVIPLNDDQIRPTPEFGAAVDTRFISGIGT 131

Query: 504 IEKQKRMILLLDVEQLLDGKEL 525
             +  RM++LLD+E LLD  EL
Sbjct: 132 --QDDRMLILLDIETLLDSTEL 151



 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 3/135 (2%)

Query: 30  GNARQFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRH 89
           G   +F+ F +  + + V + +VQEI     V  +P +P  ++G+ NLRG+++PVI LR 
Sbjct: 9   GTGGEFLSFALGEEHYGVDILKVQEIRGYDSVTRLPDAPDYIKGVINLRGTIVPVIDLRL 68

Query: 90  VFGMAPVVHDDATRVVVLD-QGRPVGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTG 148
              +    +D  T ++VL+ + R VG+VVD V++V+ +  D I P+   G  VDT  ++G
Sbjct: 69  KLRLKEARYDAFTVMIVLNVEDRVVGIVVDSVSDVIPLNDDQIRPTPEFGAAVDTRFISG 128

Query: 149 MIKGDGDRAMVMILD 163
           +  G  D  M+++LD
Sbjct: 129 I--GTQDDRMLILLD 141



 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 7/110 (6%)

Query: 206 QLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPLVGLREMFG 265
           + +SF +  + Y + I +VQEI      +T +P+ P ++ GV+ LR  ++P++ LR    
Sbjct: 13  EFLSFALGEEHYGVDILKVQEIRGYDS-VTRLPDAPDYIKGVINLRGTIVPVIDLRLKLR 71

Query: 266 LPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMP 315
           L          ++V+++E       R VG+V+DSV +V+ +    I P P
Sbjct: 72  LKEARYDAFTVMIVLNVE------DRVVGIVVDSVSDVIPLNDDQIRPTP 115