Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 172 a.a., chemotaxis signal transduction protein from Dechlorosoma suillum PS

 Score = 90.1 bits (222), Expect = 5e-23
 Identities = 53/143 (37%), Positives = 82/143 (57%), Gaps = 7/143 (4%)

Query: 34  QFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRHVFGM 93
           Q + F + N+LFAV +  V+EII    +  VP+ P  + G+ NLRG+V+PVI LR  FG 
Sbjct: 18  QCLTFQLGNELFAVGILNVREIIEYGHLTVVPMMPDLVRGVINLRGAVVPVIDLRRRFGH 77

Query: 94  APVVHDDATRVVVL-----DQGRPVGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTG 148
           AP V    T +V++     ++ + VG++VD V  V+ +    IEP  A G  + TD + G
Sbjct: 78  APTVVGRRTCIVIVETPTAEETQVVGIMVDAVNEVLDIPDTQIEPPPAFGTHLRTDFIRG 137

Query: 149 MIKGDGDRAMVMILDAAKVVARE 171
           M K   D+  +++LD   V+A +
Sbjct: 138 MAK--MDKGFILVLDLNHVLAED 158



 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 8/141 (5%)

Query: 385 QFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRRRFG 444
           Q + F+L NE + V I +V+EI+     LT VP  PD + GV+NLRG V+PV+D RRRFG
Sbjct: 18  QCLTFQLGNELFAVGILNVREIIEYGH-LTVVPMMPDLVRGVINLRGAVVPVIDLRRRFG 76

Query: 445 -LPGMERNDRQRIMVYTIRGVRT---GFIVDSVSEVIRIPASLIGPAPVLSDE-QQRLIR 499
             P +       ++V T     T   G +VD+V+EV+ IP + I P P      +   IR
Sbjct: 77  HAPTVVGRRTCIVIVETPTAEETQVVGIMVDAVNEVLDIPDTQIEPPPAFGTHLRTDFIR 136

Query: 500 RVANIEKQKRMILLLDVEQLL 520
            +A ++  K  IL+LD+  +L
Sbjct: 137 GMAKMD--KGFILVLDLNHVL 155



 Score = 60.8 bits (146), Expect = 4e-14
 Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 7/125 (5%)

Query: 195 VQAATDGDDES--QLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRN 252
           V AA + + E+  Q ++F++  + +A+ I  V+EI++  G +T VP  P  V GV+ LR 
Sbjct: 5   VTAAPERESEARTQCLTFQLGNELFAVGILNVREIIEY-GHLTVVPMMPDLVRGVINLRG 63

Query: 253 RLLPLVGLREMFG-LPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALI 311
            ++P++ LR  FG  PT+    T    +V +E       + VG+++D+V EVL +    I
Sbjct: 64  AVVPVIDLRRRFGHAPTVVGRRT---CIVIVETPTAEETQVVGIMVDAVNEVLDIPDTQI 120

Query: 312 DPMPA 316
           +P PA
Sbjct: 121 EPPPA 125