Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 179 a.a., CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 86.7 bits (213), Expect = 6e-22
 Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 12/170 (7%)

Query: 34  QFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRHVFGM 93
           Q++ F +  ++FA+ +  V+E++ +  +  +P +P  + G+ NLRG  +PV+ LR  FGM
Sbjct: 6   QYLTFTLGEEVFALDIGTVREVLELTAITRIPRTPEFMRGVINLRGRAVPVLELRRKFGM 65

Query: 94  APVVHDDATRVVVLD-----QGRPVGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTG 148
            P      T +++++     +   +G +VD V  V+ + +D IEP+  +G  V  D + G
Sbjct: 66  EPTTDTVNTCIIIVEAELEGEAAVIGTLVDSVREVIEIPSDAIEPAPRMGTAVRQDFIKG 125

Query: 149 MIKGDGDRAMVMILDAAKV-----VAREFQAIGSAPLAPSLGEAGRAEDG 193
           M  G  +   V+ILD  ++     +A    AIG+ PLA   G    A  G
Sbjct: 126 M--GHRNDGFVIILDGNRIFSVEELAATGAAIGNVPLAGDGGMPAAALAG 173



 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 8/156 (5%)

Query: 382 DEEQFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRR 441
           +  Q++ F L  E + + I +V+E++ +   +TR+P+TP+F+ GV+NLRG  +PV++ RR
Sbjct: 3   ETSQYLTFTLGEEVFALDIGTVREVLELTA-ITRIPRTPEFMRGVINLRGRAVPVLELRR 61

Query: 442 RFGLPGMERNDRQRIMVYTI----RGVRTGFIVDSVSEVIRIPASLIGPAPVLSDE-QQR 496
           +FG+          I++            G +VDSV EVI IP+  I PAP +    +Q 
Sbjct: 62  KFGMEPTTDTVNTCIIIVEAELEGEAAVIGTLVDSVREVIEIPSDAIEPAPRMGTAVRQD 121

Query: 497 LIRRVANIEKQKRMILLLDVEQLLDGKELAVVGSVI 532
            I+ + +  +    +++LD  ++   +ELA  G+ I
Sbjct: 122 FIKGMGH--RNDGFVIILDGNRIFSVEELAATGAAI 155



 Score = 72.8 bits (177), Expect = 9e-18
 Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 11/174 (6%)

Query: 203 DESQLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPLVGLRE 262
           + SQ ++F +  + +AL I  V+E++++   IT +P TP  + GV+ LR R +P++ LR 
Sbjct: 3   ETSQYLTFTLGEEVFALDIGTVREVLELTA-ITRIPRTPEFMRGVINLRGRAVPVLELRR 61

Query: 263 MFGL-PTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMPALLART 321
            FG+ PT   T+T    ++ +E    G    +G ++DSV+EV+ +    I+P P    R 
Sbjct: 62  KFGMEPT---TDTVNTCIIIVEAELEGEAAVIGTLVDSVREVIEIPSDAIEPAP----RM 114

Query: 322 GNLGEIEAICRLQGGN-RLVSILSADAMFNSDEIRAVAANALGEEDAVADEETP 374
           G     + I  +   N   V IL  + +F+ +E+ A  A A+G      D   P
Sbjct: 115 GTAVRQDFIKGMGHRNDGFVIILDGNRIFSVEELAATGA-AIGNVPLAGDGGMP 167