Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 164 a.a., CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  119 bits (297), Expect = 1e-31
 Identities = 69/148 (46%), Positives = 94/148 (63%), Gaps = 4/148 (2%)

Query: 385 QFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRRRFG 444
           Q V F L  EE+GV I  VQEI+R+   +TRVP  P F+EG++NLRG V+PV+D R RFG
Sbjct: 19  QLVTFTLGEEEFGVDILRVQEIIRMMP-VTRVPAAPSFVEGIINLRGKVIPVIDMRARFG 77

Query: 445 LPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLI-GPAPVLSDEQQRLIRRVAN 503
           L     +++ RIMV  + G   GFIVDSVS+V+R+PAS +  P  V+       IR V  
Sbjct: 78  LRAGAADEKTRIMVVEMEGRVAGFIVDSVSQVLRLPASTVEAPPAVIEGGGSDFIRGVGK 137

Query: 504 IEKQKRMILLLDVEQLLDGKELAVVGSV 531
           +E   R++LLLD++ LL   E AV+  +
Sbjct: 138 LE--GRLLLLLDLDLLLGETEKAVLDGI 163



 Score = 86.3 bits (212), Expect = 7e-22
 Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 1/135 (0%)

Query: 30  GNARQFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRH 89
           G   Q V F +  + F V +  VQEIIRM  V  VP +P+ +EG+ NLRG V+PVI +R 
Sbjct: 15  GMLLQLVTFTLGEEEFGVDILRVQEIIRMMPVTRVPAAPSFVEGIINLRGKVIPVIDMRA 74

Query: 90  VFGMAPVVHDDATRVVVLD-QGRPVGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTG 148
            FG+     D+ TR++V++ +GR  G +VD V+ V+ + A  +E   A+     +D + G
Sbjct: 75  RFGLRAGAADEKTRIMVVEMEGRVAGFIVDSVSQVLRLPASTVEAPPAVIEGGGSDFIRG 134

Query: 149 MIKGDGDRAMVMILD 163
           + K +G   +++ LD
Sbjct: 135 VGKLEGRLLLLLDLD 149



 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 50/148 (33%), Positives = 86/148 (58%), Gaps = 10/148 (6%)

Query: 206 QLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPLVGLREMFG 265
           QLV+F +  +E+ + I RVQEI+++   +T VP  P+ V G++ LR +++P++ +R  FG
Sbjct: 19  QLVTFTLGEEEFGVDILRVQEIIRMMP-VTRVPAAPSFVEGIINLRGKVIPVIDMRARFG 77

Query: 266 LPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMPALLARTGNLG 325
           L   A  E  +I+VV +E      GR  G ++DSV +VLR+  + ++  PA++   G   
Sbjct: 78  LRAGAADEKTRIMVVEME------GRVAGFIVDSVSQVLRLPASTVEAPPAVI-EGGGSD 130

Query: 326 EIEAICRLQGGNRLVSILSADAMFNSDE 353
            I  + +L+G  RL+ +L  D +    E
Sbjct: 131 FIRGVGKLEG--RLLLLLDLDLLLGETE 156



 Score = 33.5 bits (75), Expect = 6e-06
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 378 GTTDDEEQFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKT------PDFIEGVVNLRG 431
           G  D++ + +   +     G  +DSV +++R+P      P         DFI GV  L G
Sbjct: 81  GAADEKTRIMVVEMEGRVAGFIVDSVSQVLRLPASTVEAPPAVIEGGGSDFIRGVGKLEG 140

Query: 432 VVLPVVD 438
            +L ++D
Sbjct: 141 RLLLLLD 147