Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 158 a.a., CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  129 bits (325), Expect = 6e-35
 Identities = 68/152 (44%), Positives = 103/152 (67%), Gaps = 4/152 (2%)

Query: 381 DDEEQFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQR 440
           D+  Q V F + +EE+GV I  VQEI+R  E +T+VP+ P+F+EGV+NLRG V+P++D R
Sbjct: 10  DELLQLVTFSIGDEEFGVDILKVQEIIRTME-ITKVPRAPEFVEGVINLRGKVIPIIDLR 68

Query: 441 RRFGLPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLI-GPAPVLSDEQQRLIR 499
           RRFGL     +   RI+V  I  +  GF+VDSVSEV+RIPAS +  P PV++  +   I 
Sbjct: 69  RRFGLDSKSHDKHTRIIVIEINNMIVGFVVDSVSEVLRIPASTVEPPPPVVAGLESEYIS 128

Query: 500 RVANIEKQKRMILLLDVEQLLDGKELAVVGSV 531
            V  +  Q R+++LLD+++LL   +++V+G +
Sbjct: 129 GVGKL--QDRLLILLDLDKLLSNDDMSVLGHI 158



 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 47/143 (32%), Positives = 86/143 (60%), Gaps = 3/143 (2%)

Query: 34  QFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRHVFGM 93
           Q V F + ++ F V + +VQEIIR  ++  VP +P  +EG+ NLRG V+P+I LR  FG+
Sbjct: 14  QLVTFSIGDEEFGVDILKVQEIIRTMEITKVPRAPEFVEGVINLRGKVIPIIDLRRRFGL 73

Query: 94  APVVHDDATRVVVLD-QGRPVGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTGMIKG 152
               HD  TR++V++     VG VVD V+ V+ + A  +EP   +   ++++ ++G+  G
Sbjct: 74  DSKSHDKHTRIIVIEINNMIVGFVVDSVSEVLRIPASTVEPPPPVVAGLESEYISGV--G 131

Query: 153 DGDRAMVMILDAAKVVAREFQAI 175
                ++++LD  K+++ +  ++
Sbjct: 132 KLQDRLLILLDLDKLLSNDDMSV 154



 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 50/153 (32%), Positives = 91/153 (59%), Gaps = 10/153 (6%)

Query: 202 DDESQLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPLVGLR 261
           D+  QLV+F +  +E+ + I +VQEI++    IT VP  P  V GV+ LR +++P++ LR
Sbjct: 10  DELLQLVTFSIGDEEFGVDILKVQEIIRTME-ITKVPRAPEFVEGVINLRGKVIPIIDLR 68

Query: 262 EMFGLPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMPALLART 321
             FGL + +  +  +I+V+ +      +   VG V+DSV EVLR+  + ++P P ++A  
Sbjct: 69  RRFGLDSKSHDKHTRIIVIEI------NNMIVGFVVDSVSEVLRIPASTVEPPPPVVAGL 122

Query: 322 GNLGEIEAICRLQGGNRLVSILSADAMFNSDEI 354
            +   I  + +LQ  +RL+ +L  D + ++D++
Sbjct: 123 ES-EYISGVGKLQ--DRLLILLDLDKLLSNDDM 152