Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 170 a.a., CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 51/148 (34%), Positives = 89/148 (60%), Gaps = 4/148 (2%)

Query: 382 DEEQFVAFRLMNEEYGVPIDSVQEIVRVPEELTRVPKTPDFIEGVVNLRGVVLPVVDQRR 441
           DE +F++F L  E Y + I SV+EI R  E +T++   P FI+GV+NLRG ++P+VD R 
Sbjct: 17  DEVEFLSFVLGEEHYALDIMSVKEI-RGYEPVTKIANAPSFIKGVLNLRGDIVPIVDLRM 75

Query: 442 RFGLPGMERNDRQRIMVYTIRGVRTGFIVDSVSEVIRIPASLIGPAPVLSDE-QQRLIRR 500
           +F +     N+   +++  +     G +VD+VS+VI++ A  I PAP        R ++ 
Sbjct: 76  KFAVGSATYNEFTIVIMLNVFDRIVGIVVDAVSDVIKLAAEEILPAPEFGVAFDSRYLKG 135

Query: 501 VANIEKQKRMILLLDVEQLLDGKELAVV 528
           +A +E   +MI+L++++ L+   EL ++
Sbjct: 136 LATVE--DKMIILVNIQALISSDELGLI 161



 Score = 67.0 bits (162), Expect = 5e-16
 Identities = 40/149 (26%), Positives = 84/149 (56%), Gaps = 2/149 (1%)

Query: 34  QFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSVLPVIRLRHVFGM 93
           +F+ F +  + +A+ +  V+EI     V  +  +P+ ++G+ NLRG ++P++ LR  F +
Sbjct: 20  EFLSFVLGEEHYALDIMSVKEIRGYEPVTKIANAPSFIKGVLNLRGDIVPIVDLRMKFAV 79

Query: 94  APVVHDDATRVVVLDQ-GRPVGLVVDRVANVVSVEADHIEPSGAIGGTVDTDLLTGMIKG 152
               +++ T V++L+   R VG+VVD V++V+ + A+ I P+   G   D+  L G+   
Sbjct: 80  GSATYNEFTIVIMLNVFDRIVGIVVDAVSDVIKLAAEEILPAPEFGVAFDSRYLKGLATV 139

Query: 153 DGDRAMVMILDAAKVVAREFQAIGSAPLA 181
           + D+ ++++   A + + E   I +  L+
Sbjct: 140 E-DKMIILVNIQALISSDELGLIDANSLS 167



 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 41/164 (25%), Positives = 90/164 (54%), Gaps = 10/164 (6%)

Query: 203 DESQLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLPLVGLRE 262
           DE + +SF +  + YAL I  V+EI      +T + N P+ + GV+ LR  ++P+V LR 
Sbjct: 17  DEVEFLSFVLGEEHYALDIMSVKEIRGYEP-VTKIANAPSFIKGVLNLRGDIVPIVDLRM 75

Query: 263 MFGLPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMPALLARTG 322
            F + +    E   ++++++        R VG+V+D+V +V+++    I P P       
Sbjct: 76  KFAVGSATYNEFTIVIMLNV------FDRIVGIVVDAVSDVIKLAAEEILPAPE-FGVAF 128

Query: 323 NLGEIEAICRLQGGNRLVSILSADAMFNSDEIRAVAANALGEED 366
           +   ++ +  ++  ++++ +++  A+ +SDE+  + AN+L +++
Sbjct: 129 DSRYLKGLATVE--DKMIILVNIQALISSDELGLIDANSLSDQE 170