Pairwise Alignments

Query, 533 a.a., CheW protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 164 a.a., CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 63/175 (36%), Positives = 100/175 (57%), Gaps = 19/175 (10%)

Query: 353 EIRAVAANALGEEDAVADEETPGYLGTTDDEEQFVAFRLMNEEYGVPIDSVQEIVRVPEE 412
           + R VAA A  ++DAV                Q+V F+L NE YG+ +  VQE++R  E 
Sbjct: 3   DTRNVAAVAASKDDAVL---------------QWVTFKLDNETYGINVMQVQEVLRYTE- 46

Query: 413 LTRVPKTPDFIEGVVNLRGVVLPVVDQRRRFGLPGMERNDRQRIMVYTIRGVRTGFIVDS 472
           +  VP  P ++ G++NLRG V+ V+D R RFGL   E +D  RI++        G +VDS
Sbjct: 47  IAPVPGAPHYVLGIINLRGNVVTVIDTRSRFGLQSAEVDDSTRIVIIEAEKQVIGILVDS 106

Query: 473 VSEVIRIPASLIGPAP-VLSDEQQRLIRRVANIEKQKRMILLLDVEQLLDGKELA 526
           V+EV+ +  S I  AP V ++E  + I+ V+N  +   +++L+D+++LL  +E A
Sbjct: 107 VAEVVYLRRSEIDNAPNVGTEESAKFIQGVSN--RDNELLILVDLDKLLSDEEWA 159



 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 3/151 (1%)

Query: 22  AAAGALQAGNARQFVIFHVDNDLFAVPLSEVQEIIRMPDVVCVPLSPAALEGLANLRGSV 81
           AA  A +     Q+V F +DN+ + + + +VQE++R  ++  VP +P  + G+ NLRG+V
Sbjct: 8   AAVAASKDDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNV 67

Query: 82  LPVIRLRHVFGMAPVVHDDATRVVVLD-QGRPVGLVVDRVANVVSVEADHIEPSGAIGGT 140
           + VI  R  FG+     DD+TR+V+++ + + +G++VD VA VV +    I+ +  +G  
Sbjct: 68  VTVIDTRSRFGLQSAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTE 127

Query: 141 VDTDLLTGMIKGDGDRAMVMILDAAKVVARE 171
                + G+   + D  +++++D  K+++ E
Sbjct: 128 ESAKFIQGV--SNRDNELLILVDLDKLLSDE 156



 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 18/161 (11%)

Query: 197 AATDGDDESQLVSFEVAGQEYALPIERVQEIVQIPGLITDVPNTPAHVLGVMTLRNRLLP 256
           AA+  D   Q V+F++  + Y + + +VQE+++    I  VP  P +VLG++ LR  ++ 
Sbjct: 11  AASKDDAVLQWVTFKLDNETYGINVMQVQEVLRYTE-IAPVPGAPHYVLGIINLRGNVVT 69

Query: 257 LVGLREMFGLPTLALTETNKIVVVSLEGGAGGSGRSVGVVMDSVKEVLRVGHALIDPMPA 316
           ++  R  FGL +  + ++ +IV++  E       + +G+++DSV EV+ +  + ID  P 
Sbjct: 70  VIDTRSRFGLQSAEVDDSTRIVIIEAE------KQVIGILVDSVAEVVYLRRSEIDNAP- 122

Query: 317 LLARTGNLGEIEAICRLQG----GNRLVSILSADAMFNSDE 353
                 N+G  E+   +QG     N L+ ++  D + + +E
Sbjct: 123 ------NVGTEESAKFIQGVSNRDNELLILVDLDKLLSDEE 157