Pairwise Alignments

Query, 349 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

Subject, 329 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 99.8 bits (247), Expect = 9e-26
 Identities = 87/325 (26%), Positives = 145/325 (44%), Gaps = 27/325 (8%)

Query: 1   MKKFLSSLVLAASLVAGPALAADAPVDVSQVPKGFSAKDVGKSYSIATVVKVDGIAWFDR 60
           MK   S +V AA  VA  A AA A                 ++  IA VVK  GI +F+ 
Sbjct: 1   MKVLKSLMVTAAVAVALMANAAHA-----------------ENKKIALVVKALGIGFFEA 43

Query: 61  MREGAKQFGADTGH-DTWMVGPSQADAAAQVQLVENLIAQGVDAICVVPFSVEALEPVLK 119
             +GA++   + G  +    GP+   A  Q++++ +LIAQ VDAI V     +AL P LK
Sbjct: 44  ANKGAQEAAKELGDVEIIYTGPTSTTAEGQIEVINSLIAQKVDAIAVSANDTDALVPALK 103

Query: 120 KARDRGIVVIAHEASNITNADFV-LEAFDNLAYGAKLMEVLGTYMKGEGKYVTTVGSLTS 178
           KA DRGI VI+ ++        + L    +   G  ++++    +   G       S T+
Sbjct: 104 KAMDRGIKVISWDSGVAKEGRLMHLNPSSSPLIGNMIIKLAADNLPEGGDVAVLSASATA 163

Query: 179 KSQNEWIDGAIAYQKAHFPKMEQATGRLETYDDANTDYNKLKEVLTTYPDIKGILGGPMP 238
            +QN WI      Q  +  K       +   D A+  Y + + ++ ++P++K I+    P
Sbjct: 164 TNQNTWIAEMKKVQGNY--KGINVVATVYGDDLADKSYRETQGLIQSHPNLKAIIA---P 218

Query: 239 TSAG---AGRLISERGLKDKLFFAGTGLVSVAGEYLSKGDIQYIQFWDPAVAAYAMNIVA 295
           TS G   A + +++ G   ++   G GL S    ++  G  +    W+P    Y+  ++A
Sbjct: 219 TSVGIVAAAQAVTDAGKIGQINVTGLGLPSEMAGHVKSGASKSFAIWNPIDLGYSATMIA 278

Query: 296 VMALDGKADQIKAGLNLGLPGYTSL 320
              ++G   +  A L +G  G   L
Sbjct: 279 YDLINGAEAKPGAELKMGRMGTVKL 303