Pairwise Alignments

Query, 349 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

Subject, 345 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 32/310 (10%)

Query: 52  VDGIAWFD------RMREGAKQFGADTGHDTWMVGPSQADAAAQVQLVENLIAQGVDAIC 105
           V G++W +      +  E A +   +   D ++   +Q+ AA Q+  +E+LIAQG +A+ 
Sbjct: 27  VIGVSWSNFQEERWKTDEAAIKAALEASGDKYISADAQSSAAKQLTDIESLIAQGANALI 86

Query: 106 VVPFSVEALEPVLKKARDRGIVVIAHEASNITNADFVLEAFDNLAYGAKLMEVLGTYMKG 165
           V+    +A+ P ++KA   GI V+ ++   I N D     FDN   G +L        K 
Sbjct: 87  VLAQDSDAIGPAIEKAAAEGIPVVGYDRL-IENPDAFYITFDNKEVG-RLQAREVFKQKP 144

Query: 166 EGKYVTTVGSLTSKSQNEWIDGAIAYQKAHFPKMEQATGRLETYDDANTD-------YNK 218
           EG +V   GS    + +    G +   K          G+++   +A TD          
Sbjct: 145 EGNFVFIKGSSADPNADFLFSGQLEVLKEAID-----AGKIKNVGEAYTDGWKPENAQKN 199

Query: 219 LKEVLTTYPD-IKGILGGPMPTSAGAGRLISERGLKDKLFFAGTGLVSVAGEYLSKGDIQ 277
           +++ LT   + +  ++     T+ GA   +  +GL   +  +G      A   ++ G  Q
Sbjct: 200 MEQFLTANDNKVDAVVASNDGTAGGAIAALDAQGLAGSVPVSGQDADKAALNRVALG-TQ 258

Query: 278 YIQFWDPA--VAAYAMNIVAVMALDGKADQIKA-----GLNLGLPGYTSLTAPVA-GKDK 329
            +  W  +  +   A  I   +A     D+++      G   G+   +   AP+A  KD 
Sbjct: 259 TVSVWKDSRELGKKAAEIAVALAGGKTMDEVEGVQTFNGGPKGVAMKSVFLAPLAITKDN 318

Query: 330 L--LYGAGWV 337
           L  +  AGW+
Sbjct: 319 LNVVIDAGWI 328