Pairwise Alignments

Query, 349 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

Subject, 333 a.a., sugar ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  238 bits (606), Expect = 2e-67
 Identities = 138/345 (40%), Positives = 189/345 (54%), Gaps = 24/345 (6%)

Query: 7   SLVLAASLVAGPALAADAPVDVSQVPKGFSAKDVGKSYSIATVVKVDGIAWFDRMREGAK 66
           ++ L A   A  A+A DAP                   S+ TVVKV G  WF RM EG  
Sbjct: 11  TVALGALCAAQLAVAQDAP-------------------SVVTVVKVTGENWFTRMEEGVV 51

Query: 67  QFGADT-GHDTWMVGPSQADAAAQVQLVENLIAQGVDAICVVPFSVEALEPVLKKARDRG 125
            +G D     T  +GP++ADAA Q++L+E+L+A+ V+AI VVP    ALE V K+A +RG
Sbjct: 52  AYGKDNPAVSTSQIGPAKADAAQQLRLIEDLVAKNVNAIAVVPMDPSALEGVFKRAMNRG 111

Query: 126 IVVIAHEASNITNADFVLEAFDNLAYGAKLMEVLGTYMKGEGKYVTTVGSLTSKSQNEWI 185
           I +I HEA ++ N    +EAFDN  +GA+  E L   M   GK+ + VGSL S +  +W 
Sbjct: 112 IKIITHEADSLKNTQVDIEAFDNKVFGARFNEKLAECMGKSGKWTSFVGSLGSLTHVQWA 171

Query: 186 DGAIAYQKAHFPKMEQATGRLETYDDANTDYNKLKEVLTTYPDIKGILGGPMPTSAGAGR 245
           DG  A     +P+ME  + + E+++DAN  Y K +E+L  YPDIKG  GG      G GR
Sbjct: 172 DGG-AENAKKYPEMELVSEKNESFNDANKAYEKAREILRKYPDIKGFQGGSAIDVIGIGR 230

Query: 246 LISERGLKDKLFFAGTGLVSVAGEYLSKGDIQYIQFWDPAVAAYAMNIVAVMALDGKADQ 305
            + E GL  K+   G GL     +YL  G +Q I FWDP  A Y MN VA + ++GK  +
Sbjct: 231 AVEEAGLVGKVCVVGLGLPKDTAKYLESGAVQSISFWDPKDAGYVMNKVAQLVIEGK--E 288

Query: 306 IKAGLNLGLPGYTSLTAPVA-GKDKLLYGAGWVGVTKDNMEDYNF 349
           I  G++LG+PGY  ++     G   ++ G  WV V K N   Y F
Sbjct: 289 ITDGMDLGVPGYNKVSVKNGPGDGIIVVGEAWVDVDKSNYSQYPF 333