Pairwise Alignments

Query, 542 a.a., Alpha amylase, catalytic region (NCBI) from Rhodospirillum rubrum S1H

Subject, 562 a.a., alpha,alpha-phosphotrehalase from Vibrio cholerae E7946 ATCC 55056

 Score =  324 bits (831), Expect = 5e-93
 Identities = 193/513 (37%), Positives = 267/513 (52%), Gaps = 50/513 (9%)

Query: 6   WWKRAVIYQIYPRSFQDADGDGIGDLAGIAQRLDYLSWLGVDAIWISPFYTSPMKDFGYD 65
           WWK A IYQIYP+SF D+   G+GDL GI  +LDYL  LG++AIW++P Y SPM D GYD
Sbjct: 10  WWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNGYD 69

Query: 66  IQDYRDVDPIFGTLADFDALAARARALGLKLILDFVPNHTSDRHPWFLESRQSPASAKRD 125
           I DY  ++P FGT+ DF+ L   A   G+++I+D V NHTS  H WF  +     S  RD
Sbjct: 70  IADYYAINPDFGTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPYRD 129

Query: 126 WYIWRDPAADGGPPTNWLAEFGGSAWEYDEASGQYYYHAFLKEQPDLNWRNPEVRAAMYD 185
           +YIWR P  +GG P NW ++FGGSAW  DEA+G+YY H F KEQ DLNW NP+VR  + +
Sbjct: 130 YYIWRKP-VNGGVPNNWQSKFGGSAWALDEATGEYYLHLFAKEQADLNWENPQVREEVKN 188

Query: 186 AMRFWLERGVDGFRVDVMWHLIKDDQFRDNPPNPARPPNAGPANALIPLYTADRPEVHDI 245
            + FW E+GVDGFR+DV+  + K   F ++     R             +  D P VH+ 
Sbjct: 189 IIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGR------------RFYTDGPRVHEY 236

Query: 246 VREMRAVVDAYPERVLIGEIWLPT-DRLVTYYGHDLRGAHLPFNFQLI------GAAW-- 296
           ++E+   V      V +GE+   T +    Y   D R   + FNF  +      G  W  
Sbjct: 237 LQEISRDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTK 296

Query: 297 ---DAGVIKEIVGDYEKALPRGGWPNWVMGNHDKGRIASRLGPRQ------ARLAMLLLL 347
              D   +K+I   ++  L   GW      NHD+ RI SRLG  Q      A++    + 
Sbjct: 297 APFDFLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIH 356

Query: 348 TLRGTPTLYYGDEIAM-----------RDVPIPPDRVCDPYEKNVPGLGL-------GRD 389
            ++GTP +Y G+EI M           RDV           ++ V    +        RD
Sbjct: 357 LMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQGVSESDMLAILAQKSRD 416

Query: 390 PQRTPMQWEDAPQAGFTRASRSWLPIAADASTVNVAAQRAAPASMLTLVHRLIALRKAEA 449
             RTPMQW+ +  AGFTR    W+ +A +   +N  A    P S+     RL++LRK  A
Sbjct: 417 NSRTPMQWDASLNAGFTR-GEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVA 475

Query: 450 ALTIGDYGALDAPERVVMFLRRVPGRRLLIALN 482
            +T GDY  L    + +   +R   +++LI LN
Sbjct: 476 VITDGDYTDLLPEHKEIFAYQRRNQKQVLICLN 508