Pairwise Alignments

Query, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  215 bits (547), Expect = 1e-60
 Identities = 119/314 (37%), Positives = 176/314 (56%), Gaps = 15/314 (4%)

Query: 7   KRLALLVPMLLGASLVIFLMLRLGPSDPAMDYLRLSRIPPTVQALAETRQRLGLDQPLAV 66
           + L   VP +LG  ++ F +L+L P D A D L       T +++A  R R GLD P+  
Sbjct: 13  RTLLQAVPTILGIVILNFFLLQLAPGDAA-DVLAGEAGSATEESVAALRARFGLDSPVLE 71

Query: 67  QYWVWLNKALHLDFGVSYATGRPVLPDLLHYLPATLHLAGVALALTLGLSIPLGMWAARR 126
           Q   +L        G S   G PV   +   LP TL L  VAL + + L + LG   A  
Sbjct: 72  QLATYLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMASF 131

Query: 127 RDALPDQIVRGVAFLGVSMPNFWLGFLLVLVFSVELGWLPAMGRGG-------------- 172
              +PD+++   + L  S+P+FW+G +L+++FSV+LGWLP+ G                 
Sbjct: 132 AGRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLKGFPALLDK 191

Query: 173 AEHMIMPAVAIAFMSLSINARLLRASMLEVSGQRHVYYARLRGLSAAKVERAHILRNALL 232
           A +M++PA ++A   ++I ARL RA+MLEV     V  A  +GL+   V   HILRNAL+
Sbjct: 192 ARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTARHILRNALI 251

Query: 233 PIITATGMHVGELIGGTLVIESIFGWPGVGRFAVSAIFNRDYPVIQCFTLLMVLIFVLCN 292
           PI T  GMH+G ++GG +V+E+++ WPG+GR A  A+  RD+ V+    LL  L+ ++ N
Sbjct: 252 PITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLSSLLVIIAN 311

Query: 293 LIVDIVYAWADPRI 306
             VD+V+AW DPRI
Sbjct: 312 AAVDLVHAWLDPRI 325