Pairwise Alignments

Query, 277 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  175 bits (443), Expect = 2e-48
 Identities = 111/257 (43%), Positives = 154/257 (59%), Gaps = 13/257 (5%)

Query: 3   PLLTARAASKSYRTVSLVGRSPAKTVLSEATVTLSEGETVALLGRSGSGKSTLARLLLGL 62
           PLL+ R   K+Y +            L   +  L  GET+A++G SGSGKSTLAR LL L
Sbjct: 274 PLLSVRDVRKTYGSFE---------ALKGISFDLMPGETMAVVGESGSGKSTLARALLRL 324

Query: 63  EKPDHGTIAFRGRPLGGFSRAEWRAFRGAVQMVFQDSLGAVNPRHRVGRIIGEP-LRHLT 121
           ++PD GT  ++GR L   S AE    R  +QMVFQD   ++NPR  V ++I E  + H  
Sbjct: 325 DEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPD 384

Query: 122 TLDDAGRAARRDALLRQVGLTPEDADKLPQQMSGGQLQRVCIARALAPGPRLLVLDEAVS 181
            L  A    R   LL QVGL+ E   + P Q SGGQ QR+ IARALA  P+L++ DEAVS
Sbjct: 385 ILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVS 444

Query: 182 NLDLMLQIQMIDLLKDLQRQTGMAYLFVTHDLRLVERFCQRVIVLDEGKIVEEAPVTGAQ 241
            LD+ +Q Q+I+LL  L+R+ G+A++F+ HDL +V  F   V+V+ +G++VE   V   +
Sbjct: 445 ALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTV--RE 502

Query: 242 RFEHPASRALQRAILPA 258
            F+ P  +A  RA+L A
Sbjct: 503 VFDTP-RQAYTRALLAA 518



 Score =  141 bits (355), Expect = 4e-38
 Identities = 98/227 (43%), Positives = 132/227 (58%), Gaps = 14/227 (6%)

Query: 36  LSEGETVALLGRSGSGKSTLARLLLGL-----EKPDHGTIAFRGRPLGGFSRAEWRAFRG 90
           L +GET+A+LG SGSGKS  +  ++ L      +   G I   GR L      E R   G
Sbjct: 32  LDKGETLAILGESGSGKSVSSSAIMNLIDMPPGRISSGEILLDGRDLLTMPAEERREVNG 91

Query: 91  A-VQMVFQDSLGAVNPRHRVGRIIGEPLRHLTTLDDAGRAARRDAL--LRQVGLT-PEDA 146
             V M+FQD L  +NP + VG  I E +   TT   AG  AR +AL  LR+VG+  PE A
Sbjct: 92  RRVAMIFQDPLSHLNPVYSVGWQISEAM---TTHGLAGSKAREEALRLLRRVGIPEPERA 148

Query: 147 -DKLPQQMSGGQLQRVCIARALAPGPRLLVLDEAVSNLDLMLQIQMIDLLKDLQRQTGMA 205
             K P + SGGQ QRV IA ALA  P LL+ DE  + LD+ +Q +++ LLK+LQR+TGMA
Sbjct: 149 MRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLKLLKELQRETGMA 208

Query: 206 YLFVTHDLRLVERFCQRVIVLDEGKIVEEAPVTGAQRF-EHPASRAL 251
            L +THDL +V     RV+V+++G IVE   V    +  +HP ++ L
Sbjct: 209 VLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREIYKNPQHPYTQKL 255