Pairwise Alignments

Query, 263 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  158 bits (399), Expect = 1e-43
 Identities = 89/229 (38%), Positives = 131/229 (57%), Gaps = 9/229 (3%)

Query: 33  ARAETIRFATEGAFPPFNFTDAAGKPQGFDIDIANALCAQLKAECSMVTQDWDGIIPGLL 92
           A  + I+F  E  + PF + D   + QGFD+D+ANALC QL+A+CS   Q +D +IP L 
Sbjct: 18  AAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKCSFHNQAFDSLIPALK 77

Query: 93  AKKYDAIIASMSITPERQQSVLFTDAYYNNQFHFVGPKGKDFDLSKAGLKGKAIGAQRAT 152
            K+YDA I++M IT  R + V F++ YY+N   FV   GK  D  +A LKGK +G Q  +
Sbjct: 78  FKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGKVAD--QAALKGKRVGVQNGS 135

Query: 153 VSSQWIEDTLGDTVSLNLYDTAEEAYLDLEAGRVDLLLNDTYPTYDWLNSPAGQAYELKG 212
               ++ + L D V++  Y + ++A++D++ GR+D +  DT    +W       AY   G
Sbjct: 136 THQSFLLEQLSDVVAVP-YSSYQDAFIDMKNGRIDSVFGDTAVVAEWFKGDNNLAY--VG 192

Query: 213 ESVIK----DDVVGIALRKDDTALAAKLNGALKEIIANGTYAKINEKYF 257
           E V       +  GIA+ KD+ AL  +LN AL+ +  NG YA I  KYF
Sbjct: 193 ERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAIFNKYF 241