Pairwise Alignments

Query, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (299), Expect = 8e-32
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 15/344 (4%)

Query: 1   MRKLFTLVAAA-LAFAGLSSSPDASAAEYKAEYKLSTVLGKPFPWGIGGERWAELVKEKT 59
           M K  TL+AA+ LA    +++ +    E   ++   T   K  P GI      + V E+ 
Sbjct: 1   MFKPLTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDK-HPKGIAASLLEKRVNEEM 59

Query: 60  EGRIVMKMYPGSSLLNGDQTKEFTALRQGVIDMAVGSTINWSPQVKELNLFSMPFLLPDH 119
            G+  M+++P S+L + D+  E  AL  G + +A  S   +    K+  +F +PFL  D 
Sbjct: 60  NGKACMQVFPNSTLYDDDKVLE--ALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDV 117

Query: 120 AGLDALTKGGVGQRLFDLLATKDVVPLAWGENGFRELSNSRHAIRTPADMKGLKIRVVGS 179
             +D       G+ L + +  + V  L +  NG +++S ++  I  PAD KGLK RV  S
Sbjct: 118 DAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANK-PILVPADAKGLKFRVQAS 176

Query: 180 PLFLDTFSALGANPTQMSWADAQPSLSTGAVDGQENPLSVFMTAKLPTLGQKHLTLWGYV 239
            + +  F  +GANP +MS+A+    L T  +DGQEN  S     K   +          +
Sbjct: 177 DVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGI 236

Query: 240 ADPLIFVVNKEVWESWSEEDRAAVRAAALQAAGEEVALARKGITAEDDALLKD-ITAQGV 298
            D L+   +K     W +   A VR    +    EV + R   + + + L K  I   G 
Sbjct: 237 LDYLVVTSSK-----WWDGLPADVRDQFAKIL-NEVTIERNAESNKVEELNKQYIIEAGG 290

Query: 299 SITALSAAEKAAFRDATRAVYDKWSKQIGADLVKEAETAIAAGR 342
            +  L+  ++  + DA + V+ K+ K IGADL+   E A+AA +
Sbjct: 291 VVRTLTPEQRQQWVDALKPVWQKFEKDIGADLI---EAALAANQ 331