Pairwise Alignments

Query, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (248), Expect = 7e-26
 Identities = 88/334 (26%), Positives = 158/334 (47%), Gaps = 31/334 (9%)

Query: 4   LFTLVAAALAFAGLSSSPDASAAEYKAEYKLSTVLGKPFPWGIGGERWAELVKEKTEGRI 63
           + TL AAA   A  +      A+    EY  + +L             A+ ++E ++G I
Sbjct: 11  ILTLSAAASVNAATTLKMGMQASVGSVEYNSAKML-------------ADTLEEMSQGEI 57

Query: 64  VMKMYPGSSLLNGDQTKEFTALRQGVIDMAV---GSTINWSPQVKELNLFSMPFLLPDHA 120
            + +YP + L  GD       L  G +D+     G    W P+ + + L   P++  D  
Sbjct: 58  KLALYPSAQL--GDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVML---PYVAKDFD 112

Query: 121 GLDALTKGGVGQRLFDLLATK-DVVPLAWGENGFRELSNSRHAIRTPADMKGLKIRVVGS 179
            L  + +   GQ + D +  K +   L    NG RE +++R  + +  D KGLK+RV  +
Sbjct: 113 HLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNR-PLNSIEDFKGLKLRVPNA 171

Query: 180 PLFLDTFSALGANPTQMSWADAQPSLSTGAVDGQENPLSVFMTAKLPTLGQKHLTLWGYV 239
              L+     GA+PT MS+++   +L T AVDGQENPL    T K   + QK+L +  ++
Sbjct: 172 KQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEV-QKNLAMTHHI 230

Query: 240 ADPLIFVVNKEVWESWSEEDRAAVRAAALQAAGEEVALARKGITAEDDALLKDITAQGVS 299
            +  + ++++  W+  S+ D+  ++  A+Q  G+      K   AE   L+    ++G++
Sbjct: 231 VNDQMVIISESTWQKLSDTDKDIIQ-KAVQKVGDAHTQTVKTQEAE---LVSFFKSEGIN 286

Query: 300 ITALSAAEKAAFRDATRAVYDKWSKQIGADLVKE 333
           +T     +   FR+A + +Y ++   IG  +V +
Sbjct: 287 VT---YPDLEPFREAMQPLYKEFDSNIGQPIVSK 317