Pairwise Alignments

Query, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 325 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  157 bits (397), Expect = 4e-43
 Identities = 112/329 (34%), Positives = 173/329 (52%), Gaps = 14/329 (4%)

Query: 12  LAFAGLSSSPDASAAEYKAEYKLSTVLGKPFPWGIGGERWAELVKEKTEGRIVMKMYPGS 71
           L  A LS     +AA+    Y+LS       P  +   ++AELV++K+EGR+  K+  G 
Sbjct: 7   LTAAVLSLCAGPAAAQ---TYQLSHNAAAGNPKDVASLKFAELVEQKSEGRL--KIDVGG 61

Query: 72  SLLNGDQTKEFTALRQGVIDMAVGSTINWSPQVKELNLFSMPFLLPDHAGLDALTKGGVG 131
           S   GD  +  T +R G I  +  S    S  V E+ L  +PFL  D    +A+  G VG
Sbjct: 62  SAQFGDDAETITNMRLGTIAFSANSQGTTSAVVPEIALLGLPFLFQDLKQAEAVMDGPVG 121

Query: 132 QRLFDLLATKDVVPLAWGENGFRELSNSRHAIRTPADMKGLKIRVVGSPLFLDTFSALGA 191
            ++      + +V LAW  NG RE SNS+  I  P+D+ G+KIR     + +D F+ALGA
Sbjct: 122 DKIAAAAEQQGLVVLAWWNNGIRETSNSKRQITAPSDLAGMKIRTPPDQMTVDIFTALGA 181

Query: 192 NPTQMSWADAQPSLSTGAVDGQENPLSVFMTAKLPTLGQKHLTLWGYVADPLIFVVNKEV 251
           +PT M++++   +L  G VDGQENPL    ++KL  + Q ++++  +  +   F+ +K V
Sbjct: 182 SPTPMAFSELYIALQQGVVDGQENPLINIHSSKLHEV-QPYISMTNHKYESTPFLASKIV 240

Query: 252 WESWSEEDRAAVRAAALQAAGEEVALARKGITAEDDALLKDITAQGVSITALSAAEKAAF 311
           +++   ED+  +R AA +A      L R+ +  +   L  ++ A GV I   +  + A F
Sbjct: 241 FDALLPEDQQIIRDAAREAG----QLNRQMVGEQTTRLRGELEAAGVKI---NDVDPAPF 293

Query: 312 RDATRAVYDKWSKQIGADLVKEAETAIAA 340
             AT++VYDKW  Q   DLV E   A  A
Sbjct: 294 VQATQSVYDKWRAQY-PDLVDELVGAAKA 321