Pairwise Alignments

Query, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 330 a.a., substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  104 bits (259), Expect = 4e-27
 Identities = 96/327 (29%), Positives = 150/327 (45%), Gaps = 29/327 (8%)

Query: 7   LVAAALAFAGLSSSPDASAAEYKAEYKLSTVLGKPFPWGIGGERWAELVKEKTEGRIVMK 66
           ++ AAL  AG +S+ +   A   AE  + TV            + AE +   T G + + 
Sbjct: 14  MLGAAL-LAGAASATELRYAHVGAEGDIQTVYAA---------QAAEGIAAATGGEVTVT 63

Query: 67  MYPGSSLLNGDQTKEFTALRQGVIDMAVGSTINWSPQVKELNLFSMPFLLPDHAGLDALT 126
           +YP S L  G   +    +R G I M      + +  V E+ +F+ PF+  D A   A T
Sbjct: 64  VYPASQL--GGVAEMVDGVRMGSISMGHHDFASLARLVPEVAVFNAPFIYRDGAHALAAT 121

Query: 127 ---KGGVGQRLFDLLATKDVVPLAWGENGFRELSNSRHAIRTPADMKGLKIRVVGSPLFL 183
                   Q + + L  + V  +     G R +S S   ++TPAD+ G   R V   L++
Sbjct: 122 DPQSSPALQAINEKLIAQGVRIVGRIYRGDRHIS-SNFPVKTPADLAGKPFRAVPLELWV 180

Query: 184 DTFSALGANPTQMSWADAQPSLSTGAVDGQENPLSVFMTAKLPTLGQKHLTLWGYVADPL 243
                 GA PT +  A+   +L TG V GQENPL+   +  L  + Q HL++ G++   L
Sbjct: 181 SMVKGFGAIPTPVEVAELPTALMTGVVVGQENPLTRIASNNLNEV-QSHLSMTGHMRAVL 239

Query: 244 IFVVNKEVWESWSEEDRAAVRAAALQAAGEEVALARKGITAEDDALLKDITAQGVS-ITA 302
              +N+EVW+  SEE R A+     +   EE   + K  T  +  L+K++  +G++ IT 
Sbjct: 240 AVFINEEVWQGLSEEQRTAL----TKVLDEEAQKSLKMATESEADLVKELKGRGMTVITE 295

Query: 303 LSAAEKAAFRDATRAVYDKWSKQIGAD 329
               + AAFR       +K   QIG D
Sbjct: 296 AEGLDVAAFR-------EKVGAQIGQD 315