Pairwise Alignments

Query, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 93.2 bits (230), Expect = 8e-24
 Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 18/320 (5%)

Query: 6   TLVAAALAFAGLS-SSPDASAAEYKAEYKLSTVLGKPFPWGIGGERWAELVKEKTEGRIV 64
           T +    A A LS ++P    A+     +L  V     PW     +  E +K +T GR+ 
Sbjct: 7   TFLGGVAAGAALSLATPSLVRAQETRTLRLGIVTPPGHPWNNAALKVGEALKAETNGRLS 66

Query: 65  MKMYPGSSLLNGDQTKEFTALRQGVIDMAVGSTINWSPQVKELNLFSMPFLLPDHAGLDA 124
           + ++P   L  G++      ++ G +D+    T     ++  +   + P+++   A +  
Sbjct: 67  ISVFPAGQL--GNEAAMLQQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAKVAK 124

Query: 125 LTKGGVGQRLFDLL-ATKDVVPLAWGENGFRELSNSRHAIRTPADMKGLKIRVVGSPLFL 183
           L +  V  +L D+L A    V LAWG    R + +++  I    D+ G+K+R+  +P + 
Sbjct: 125 LVREPVAMKLLDVLPAETGTVGLAWGITTMRVVFSAKE-IAGLDDINGMKLRINTTPAYR 183

Query: 184 DTFSALGANPTQMSWADAQPSLSTGAVDGQENPLSVFMTAKLPTLGQKHLTLWGYVADPL 243
           D +  LGA PT +       ++S G VDG E  L      +   + +  L +   +  P 
Sbjct: 184 DFYQLLGAAPTPIPTPAVFDAMSNGQVDGLEADLDFSWNQRFDKVSKTMLKM-NAIFMPC 242

Query: 244 IFVVNKEVWESWSEEDRAAVRAAALQAAGEEVALARKGITAEDDALLKDITAQGVSITAL 303
           + + +  VW++  E DR  +      A  E++        A + ALL+     G+ I  +
Sbjct: 243 VALASGRVWQTLPEADREIIARLTKSALDEQI----DATVANEPALLEKFAGAGIPIKDV 298

Query: 304 SAAEKAAFRDATR--AVYDK 321
           + A      DA R  A YDK
Sbjct: 299 TVA------DAGRIIAEYDK 312