Pairwise Alignments

Query, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 323 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  113 bits (282), Expect = 8e-30
 Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 13/323 (4%)

Query: 11  ALAFAGLSSSPDASAAEYKA-EYKLSTVLGKPFPWGIGGERWAELVKEKTEGRIVMKMYP 69
           +LA AGL  +  A A E +     +    G P   G+     A ++KEK+ GR+ ++++P
Sbjct: 7   SLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGV--TEAARIIKEKSGGRLTLEIFP 64

Query: 70  GSSLLNGDQTKEFTALRQGVIDMAVGSTINWSPQVKELNLFSMPFLLPDHAGLDALTKGG 129
            S L  G  T+    +  G +D  +         V    L S  +++ D   L  +    
Sbjct: 65  NSQL--GTFTEMMEQVTLGELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIASD 122

Query: 130 VGQRLFDLLATKDVVPLAWGENGFRELSNSRHAIRTPADMKGLKIRVVGSPLFLDTFSAL 189
            G+ + D + T+    +          + ++  I  PAD  G+K+RV  S   L    A+
Sbjct: 123 WGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPADFAGMKLRVPNSAPLLTWAKAM 182

Query: 190 GANPTQMSWADAQPSLSTGAVDGQENPLSVFMTAKLPTLGQKHLTLWGYVADPLIFVVNK 249
           GA+PT +++A+   +L T  VDGQENPL +  + K  T  Q H++L G++    + ++++
Sbjct: 183 GASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKF-TEVQSHVSLTGHLVQDQVILMSE 241

Query: 250 EVWESWSEEDRAAVRAAALQAAGEEVALARKGITAEDDALLKDITAQGVSITALSAAEKA 309
           + W +    D+  V   A +A G   AL  K ++ ++  L+ D   +G+++      +KA
Sbjct: 242 DTWNALEPADQKVV-MEAFEAGG---ALNDKLVSDKEANLVSDFRERGITVV---EPDKA 294

Query: 310 AFRDATRAVYDKWSKQIGADLVK 332
           AF++A + VY     + GAD VK
Sbjct: 295 AFQEAMKPVYADLDAKFGADTVK 317