Pairwise Alignments

Query, 342 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  181 bits (459), Expect = 2e-50
 Identities = 107/310 (34%), Positives = 177/310 (57%), Gaps = 7/310 (2%)

Query: 33  KLSTVLGKPFPWGIGGERWAELVKEKTEGRIVMKMYPGSSLLNGDQTKEFTALRQGVIDM 92
           K ++   K  P   G E++AELVKEK+ G+I +K++PG +L  G   +  +AL+ GVI+M
Sbjct: 34  KFASANNKGHPQVTGMEKFAELVKEKSGGKIEVKLFPGGTL--GGDVQTVSALQGGVIEM 91

Query: 93  AVGSTINWSPQVKELNLFSMPFLLPDHAGLDALTKGGVGQRLFDLLATKDVVPLAWGENG 152
            V +    +  VKE     +PFL       D +  G  G  L + L    +V +A+ E G
Sbjct: 92  TVLNAGILASNVKEFGAVDLPFLFDSGEEADKVMDGPFGTSLMERLPATGLVGVAYWELG 151

Query: 153 FRELSNSRHAIRTPADMKGLKIRVVGSPLFLDTFSALGANPTQMSWADAQPSLSTGAVDG 212
           FR L+N+RH +    D+KGLKIR + SP+ ++ F+ALGAN   + + +   +L TG VDG
Sbjct: 152 FRNLTNNRHPVTKLEDIKGLKIRTIQSPIPVELFNALGANAVPLPYTELYTALETGTVDG 211

Query: 213 QENPLSVFMTAKLPTLGQKHLTLWGYVADPLIFVVNKEVWESWSEEDRAAVRAAALQAAG 272
           QENP +  + AK   + QK++TL  +  +P I +V+K+ W+  ++E++  ++ AA++A  
Sbjct: 212 QENPSANIINAKFYEV-QKYMTLTRHQYNPQIVLVSKKFWDGLNDEEKTVLQQAAVEARD 270

Query: 273 EEVALARKGITAEDDALLKDITAQGVSITALSAAEKAAFRDATRAVYDKWSKQIGADLVK 332
            +  ++R+    +D A L++I   G+ ++ LSA E    RDA + + +K+S  IG + V+
Sbjct: 271 FQRKVSRE----QDAAALEEIRKTGMEVSELSAEETQKLRDAVKPMIEKFSADIGQETVE 326

Query: 333 EAETAIAAGR 342
                I   R
Sbjct: 327 ALFKEIGTAR 336