Pairwise Alignments

Query, 639 a.a., Excinuclease ABC, C subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 704 a.a., excinuclease ABC subunit UvrC from Rhodopseudomonas palustris CGA009

 Score =  691 bits (1783), Expect = 0.0
 Identities = 360/645 (55%), Positives = 459/645 (71%), Gaps = 19/645 (2%)

Query: 7   DEPDRDDGADQPDAGADPATPRGVEAIRAALRTMPSSPGVYRMIDGKGDVLYVGKARNLK 66
           DEP+    A+   AGA P    G  AI  A+R  P+SPGVYRM++ + DVLYVGKA+N+K
Sbjct: 62  DEPE----AEPAQAGAGPMAV-GRSAIARAVRLAPTSPGVYRMLNAERDVLYVGKAKNVK 116

Query: 67  RRVINYTQPHRLPVRIQRMIAATLTMEVLTTHTEAEALLLESNLIKKLKPRYNILLRDDK 126
           +R+ +Y +P    +RI RMIA T+ +EV++T TE EALLLE+NLIK+L+PR+N+ LRDDK
Sbjct: 117 KRLASYARPTGQVLRIARMIALTVEVEVISTTTETEALLLEANLIKQLRPRFNVQLRDDK 176

Query: 127 SFPYIEITSDHAFPRIVKFRGTLRKGGEYFGPFASAGAVTSTLTALQKTFLLRTCADNVF 186
           SFPYI ITSDH  P+I+K RG   + G YFGPFASAGAV  T+TALQ+ FL+R+C D+ F
Sbjct: 177 SFPYILITSDHWAPQILKHRGAQSRPGRYFGPFASAGAVNRTITALQRAFLVRSCTDSFF 236

Query: 187 ASRSRPCLLFQIKRCAAPCVDRVAEADYKALVEEARAFLSGSSKALQHDLAKRMDEAAQA 246
            SR+RPCLL+QI+RCA PC   V    Y  LV EA  FLSG S+A++  LA  M++A+  
Sbjct: 237 ESRTRPCLLYQIRRCAGPCTGEVDFPGYSELVREATDFLSGRSRAVKELLAAEMEKASGE 296

Query: 247 LDYEQAAIFRDRIKALTNVQSHQDINLPTLGEADVIACHQAGGQTCVQVFFFRGGRNNGN 306
           L++E AA++RDR+ AL+ +QS Q IN  T+ EADV A HQ GG +CV+VFFFR G+N GN
Sbjct: 297 LEFETAALYRDRLAALSAIQSQQGINPRTVEEADVFAIHQDGGYSCVEVFFFRTGQNWGN 356

Query: 307 RSFFPAHAGDEGLPEVLEAFLGQFYAGFPPPREILLLTDIPHHDLVEQALCLRAGHRVRL 366
           R++FP         EVL AF+ QFY   PPP+ ILL  +I   +L+  ALC++AGH+V +
Sbjct: 357 RAYFPRAEKSFTPAEVLGAFVAQFYDDKPPPKLILLSHEIEEAELLADALCVKAGHKVEI 416

Query: 367 VVPRRGSRRKLIDHALANAREALGRRLAESSAQRTLLEGTAVAFGLDGPLQRVEIYDNSH 426
            VP+RG +++L+ HA  NAREALGR+LA+++ Q  LLE  A   GL    QR+E+YDNSH
Sbjct: 417 TVPKRGEKKELVAHAQTNAREALGRKLADTATQARLLENLATTLGLPKTPQRIEVYDNSH 476

Query: 427 ISGTHAVGGMVVAGPEGFMKAAYRKFNIRSPDITPGDDYAMMREVMIRRFAR-------- 478
           I GT+AVG M+VAGP+GF+K  YRKFNIRS  +TPGDDYAMMREV+ RRF R        
Sbjct: 477 IQGTNAVGAMIVAGPDGFIKNQYRKFNIRSEGLTPGDDYAMMREVLQRRFKRLVTSQAEG 536

Query: 479 -----ARKEDPDRDRGQWPDLVLIDGGLGQLNAVREALAEIGVED-VPLVGVAKGPDRDA 532
                A+ +  D D  QWPDLV+IDGG GQLNA REAL+ IG+ D V L+GVAKGPDRDA
Sbjct: 537 DGEAAAKAKPKDDDVPQWPDLVIIDGGRGQLNAAREALSGIGLTDQVTLLGVAKGPDRDA 596

Query: 533 GRERFFVPGRPPFMLRHNDPVLYFIQRLRDEAHRFAIGSHRTRRSKAIGVSPLDSVPGIG 592
           GRE  F+P R    L   DPVLYFIQRLRDEAHRF IGSHRT R K I  + L  +PGIG
Sbjct: 597 GRETLFLPDRDAIKLEPRDPVLYFIQRLRDEAHRFVIGSHRTLRKKDIREAGLQEIPGIG 656

Query: 593 ASRKKALLHHFGSAKAVSQAGLTDLEAVEGISAALAKKLYDHFHS 637
            +RK+ALL HFG+ K + +A + DL  V GISA  AK++++ FH+
Sbjct: 657 PTRKRALLLHFGTLKEIERASIADLGKVPGISAESAKRIFEFFHA 701