Pairwise Alignments

Query, 639 a.a., Excinuclease ABC, C subunit (NCBI) from Rhodospirillum rubrum S1H

Subject, 657 a.a., excinuclease ABC subunit UvrC from Ralstonia sp. UNC404CL21Col

 Score =  438 bits (1126), Expect = e-127
 Identities = 262/661 (39%), Positives = 367/661 (55%), Gaps = 39/661 (5%)

Query: 8   EPDRDDGADQPDAGADPATPRGVEAI--RAALRTMPSSPGVYRMIDGKGDVLYVGKARNL 65
           +P +    + PD+  +P+ P  V     +A +  +P+ PGVYR  D +G+VLYVGKAR+L
Sbjct: 4   DPTQPQPPETPDS-VEPSAPANVPEFDAKAHIARLPNLPGVYRYFDAQGNVLYVGKARDL 62

Query: 66  KRRVINYTQPHRLPVRIQRMIAATLTMEVLTTHTEAEALLLESNLIKKLKPRYNILLRDD 125
           K+RV +Y     L  RI  M+A    ++     +EAEALLLE+NLIK L PRYNIL RDD
Sbjct: 63  KKRVSSYFNKTLLSPRIAMMVAKIARIDTTVVRSEAEALLLENNLIKALAPRYNILFRDD 122

Query: 126 KSFPYIEITSDHAFPRIVKFRGTLRKGGEYFGPFASAGAVTSTLTALQKTFLLRTCADNV 185
           KS+PY+++T  HA+PR+  +RG   +  +YFGPF SA AV  ++  LQK F LRTC D V
Sbjct: 123 KSYPYLKLTH-HAYPRMAYYRGATDRKHQYFGPFPSAHAVRESMQILQKVFQLRTCEDTV 181

Query: 186 FASRSRPCLLFQIKRCAAPCVDRVAEADYKALVEEARAFLSGSSKALQHDLAKRMDEAAQ 245
           F +R+RPCLL QI RC+ PCV  ++  DY   V  A  FL G    +   L  +M   ++
Sbjct: 182 FNNRTRPCLLHQIHRCSGPCVQAISPEDYARDVANAAGFLQGRQDEVMQTLQDKMQRYSE 241

Query: 246 ALDYEQAAIFRDRIKALTNVQSHQDI-NLPTLGEADVIACHQAGGQTCVQVFFFRGGRNN 304
           +L +EQAAI RD+I AL+ V   Q +  +    + D++A    GG  CV +   RGGR+ 
Sbjct: 242 SLAFEQAAIVRDQIGALSTVLKQQSVEEVGHASDIDILAVAIKGGHACVNLAMVRGGRHL 301

Query: 305 GNRSFFPAH-------------AGDEGLPE-----------VLEAFLGQFYAG-FPPPRE 339
           G++++FP H             AG +   E           +LEAF+ Q Y   F PP  
Sbjct: 302 GDKAYFPTHVEEGAAIVGVDVEAGGDPAAETSRDAERMASDILEAFVAQHYLDQFVPP-- 359

Query: 340 ILLLTDIPHHDLVEQALCLRAGHRVRLVVPRRGSRRKLIDHALANAREALGRRLAESSAQ 399
           +L+++   H   +  AL  +AG R+ +V   +G RR  ++ A   A  +L RRL+E  +Q
Sbjct: 360 VLVVSHQIHATELIDALAEQAGRRISVVRQPQGGRRAWLEMAEKGAELSLMRRLSEQGSQ 419

Query: 400 RTLLEGTAVAFGL---DGPLQRVEIYDNSHISGTHAVGGMVVAGPEGFMKAAYRKFNIRS 456
           +      A   G+   D    RVE +D SH +G       VV        + YR++NI+ 
Sbjct: 420 QARTRALAETIGIDLEDLAALRVECFDISHTAGEATQASCVVFHSHAMQNSEYRRYNIQ- 478

Query: 457 PDITPGDDYAMMREVMIRRFARARKEDPDRDRGQWPDLVLIDGGLGQLNAVREALAEIGV 516
            DITPGDDYA MR+V+ RR+ +   E    D    P +VLIDGG GQ+   R+   E+G+
Sbjct: 479 -DITPGDDYAAMRQVLTRRYQKI-VEQAGEDTPNMPSIVLIDGGKGQVEVARQVFEELGL 536

Query: 517 EDVPLVGVAKGPDRDAGRER-FFVPGRPPFMLRHNDPVLYFIQRLRDEAHRFAIGSHRTR 575
           +   LVGVAKG  R  G E   F  GRP   L      L  + ++RDEAHRFAI   R +
Sbjct: 537 DIGLLVGVAKGEGRKVGLETLIFADGRPSLELGQGSAALMLVAQIRDEAHRFAITGMRAK 596

Query: 576 RSKAIGVSPLDSVPGIGASRKKALLHHFGSAKAVSQAGLTDLEAVEGISAALAKKLYDHF 635
           R+KA   S L+ + GIGA R++ LL  FG  + V  A + +L  VEGIS  LA+++Y   
Sbjct: 597 RAKARNTSRLEEIEGIGAKRRQRLLARFGGLRGVMAASVDELATVEGISQTLAEEIYRQL 656

Query: 636 H 636
           H
Sbjct: 657 H 657