Pairwise Alignments

Query, 1077 a.a., AsmA (NCBI) from Rhodospirillum rubrum S1H

Subject, 703 a.a., AsmA family protein from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 3e-18
 Identities = 103/470 (21%), Positives = 187/470 (39%), Gaps = 59/470 (12%)

Query: 1   MRTLLFGTVVLIALMVGTVLAVPSFVDWNLYRDRLSAEIQRITGRALVVEGDLSLHLLPT 60
           M+ L    + L+ L+VG +LA+   V+ N ++  +  + ++ TG  LV+EGD+     P+
Sbjct: 1   MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS 60

Query: 61  PALAAQGVSLANAPGGSDPVMARVDSVQVKVDLLPLLHGEVVVRSVEIIRPVIVLERLAD 120
                    L N  G + P + +V+SV + V ++PLL  ++ + ++ +      LE L D
Sbjct: 61  IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD 120

Query: 121 GRGN----WEMRAGQGGGDEVDGRLPGAPP--VESADPLEVAFNHVEIVDGVVRYRD--- 171
           GR N     + ++            P + P   E A    +    V + + V+   D   
Sbjct: 121 GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA 180

Query: 172 -----------GGTERVIDNLDVTLVA---DRLNGPFSLQGRATA-------------LG 204
                         E V DN      A   D+    F+ QG A               + 
Sbjct: 181 GSHTKLYDVQLSVAEFVPDNWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRNIN 240

Query: 205 LPVSLQAMIGAIDAGRATQVGIKLGLENQPSVFELTGLVSGLSTGPTL--RGSMGLAVDD 262
           L  S       ID+ +     +KL          LT  V+G +    L  +GS  L V+ 
Sbjct: 241 LDASFSDPSNQIDSAK-----LKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQ 295

Query: 263 PAAALDRLGAAMGRDL---GLSAGPMKLPLRVNSRIELSSAAAKFDDMVVQLAGNEVK-- 317
             + +      +  +L    L   PMKL L  +S+I           ++ +L  N +   
Sbjct: 296 AISKVGLDALKLQAELEGAALPQSPMKLSL--DSQIAFDLTQNHLSVLLNKLTANALSFD 353

Query: 318 GGASAVFGAVPRIDAAFVASRIDLEAWKTAWSDQPGGSPAALAVAHAEEKP----PAWRF 373
           G A      +P++     +  IDL+A+    + +   +PA  A A +   P    PA   
Sbjct: 354 GKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSSSAPATNAPAEVE 413

Query: 374 P-----QDLAVTLDLAVDAAIYNGSALRDLRLSAALSKGEVTINQLSARL 418
           P     + L V  ++++D    + + L++++ + A+++G V +   +A L
Sbjct: 414 PDLSALKALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANL 463



 Score = 47.8 bits (112), Expect = 3e-09
 Identities = 83/358 (23%), Positives = 131/358 (36%), Gaps = 52/358 (14%)

Query: 616 NLTYDIEIPDPARVVRALRLDLPLAIESIDKLVLTGTVNGTANALTLRTTTTGDGATLNT 675
           N+  D    DP+  + + +L L       DK          ANALT           LN 
Sbjct: 238 NINLDASFSDPSNQIDSAKLKLDTF--EFDK----------ANALTFSVAGKAADMKLNA 285

Query: 676 EGTLVGAFAGVPTLSMGIGFAHPDAASFLAMVFPGYRAQGLPGALRLQGQLAGDLSTMAL 735
           +G+          ++  I     DA    A +  G      P  L L  Q+A DL+   L
Sbjct: 286 QGS------ASLMVNQAISKVGLDALKLQAEL-EGAALPQSPMKLSLDSQIAFDLTQNHL 338

Query: 736 SDI--QATVGAVPLSGSIAVNRKGDRPFVEADLQAGDLDLDPLLPASRLSALERPRAVRA 793
           S +  + T  A+   G   V    D P V  +L + ++DLD  L      +   P    A
Sbjct: 339 SVLLNKLTANALSFDGKADVTL-ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAA 397

Query: 794 AGLMLGGGSVAPPSLLPLRRVATSEGAVASPPDKEALADVDGALALRATSLTYAGLRLEQ 853
           A       + AP  +                PD  AL  +D A  +       +   L+ 
Sbjct: 398 ASSSSAPATNAPAEV---------------EPDLSALKALDVAGEISIDKFKASNAHLQN 442

Query: 854 ASLRAKLVDGVVTLSPVEGTLYGGRLKATAQ----RTPGPMAAYTLGLTLDGFKAGDYL- 908
                 +  GVV L      LY G ++A+AQ    +TP   A Y++   + G +    L 
Sbjct: 443 VKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTP---ATYSVKKQIKGVQVKPLLK 499

Query: 909 --AARGMAGGSGSGSLVLDLAARGEEDLVSTLSGKGVLSLTAIDVSDPSAPGRGLARL 964
                 M  G+G+    +D+  +G+    S +  K ++   AI+ +D +  G  +A L
Sbjct: 500 DVLNNEMLEGTGN----IDVNVQGQSLTPSGIQ-KNLVGTVAINFADGAVKGINVAHL 552