Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 336 a.a., peptide ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  169 bits (428), Expect = 9e-47
 Identities = 106/335 (31%), Positives = 169/335 (50%), Gaps = 16/335 (4%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNASQETLQVVRHDFGLDR 60
           M + +A R   +I    GI+++ F +    PG      +  R    E         GL++
Sbjct: 1   MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 61  PLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVVGV 120
           PL  QY   + +L   GDL   +   + V     +  P TL L + A +   V G++ GV
Sbjct: 61  PLYAQYLDYIGKL-AHGDLGESLRTRESVWTEFTSLFPATLELSMAALLFAGVLGLLAGV 119

Query: 121 LAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDT-------FLFSWVPAL 173
           +AA+ RG   D  +M + L G SMP+FW G +  +        T        L+   P  
Sbjct: 120 IAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGLTPVSGRIDLLYDIEPRT 179

Query: 174 GYKPF----SEDPAGWFKTL---VIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARA 226
           G+       + D   +F  L   ++P   L T+ + +  R+ R+S++EVL+ED+IRTARA
Sbjct: 180 GFMLIDTLLANDTGAFFDALHHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARA 239

Query: 227 KGLSERRILLRHGLRSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNL 286
           KGLS  R++  HGLR++L+  +T+ GL  G L+  GA+L E +F   G+GK   +A+   
Sbjct: 240 KGLSPSRVVFVHGLRNALIPVLTVVGLQVGTLL-AGAVLTETIFSWPGIGKWLIEAIGAR 298

Query: 287 DLPTIMATVIYASFFVVFANFIVDVLYAFLDPRVR 321
           D P +   ++  +  V+  NF+VD+LY F +PR+R
Sbjct: 299 DYPVVQNGILLIACLVILVNFVVDILYGFANPRIR 333