Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  167 bits (423), Expect = 3e-46
 Identities = 106/323 (32%), Positives = 177/323 (54%), Gaps = 16/323 (4%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAG--RNASQETLQVVRHDFGL 58
           ML     R  Q+I  +V +++++F+IF   PG+  A+  A   R A  + +  +  +FGL
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGL 60

Query: 59  DRPLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVV 118
           ++PL  ++   +  L      TSF  R Q V+  + + +  +L L + A +  +V  V +
Sbjct: 61  NKPLMERFVTYVTDLAQFDLGTSFRTR-QPVIDLINDRMWASLQLAIAAMIFALVISVPL 119

Query: 119 GVLAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDTFLFSWVPALGYKPF 178
           G +AA+  G  LD V MI  + G+SMP FWLG    L+    F      +W+P+ GY   
Sbjct: 120 GFVAALRPGSVLDTVTMIGAVSGLSMPQFWLG----LLMMYLF--ALQLNWLPSFGYGD- 172

Query: 179 SEDPAGWFKTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSERRILLRH 238
                G F+ L++P  TL    + L  R  RA +++VL  DFIRTA +KG+SE +++  H
Sbjct: 173 -----GSFRNLILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWH 227

Query: 239 GLRSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTIMATVIYA 298
             R++LV  VT  GL FG+L+ G A++ E +F   G+G +  D++ + D+P +  T++  
Sbjct: 228 VARNALVLIVTTVGLQFGSLI-GQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVI 286

Query: 299 SFFVVFANFIVDVLYAFLDPRVR 321
             + +  N  VD++YA +DPR++
Sbjct: 287 VLWFLVINTAVDLIYAAIDPRIK 309