Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 326 a.a., putative peptide ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  171 bits (434), Expect = 2e-47
 Identities = 110/330 (33%), Positives = 171/330 (51%), Gaps = 20/330 (6%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNASQETLQVVRHDFGLDR 60
           ML  +  R  Q + VL  + ++ F +F      DP   + G+  + E +  +R D GLD+
Sbjct: 1   MLAYIIRRIMQSVLVLFVVGLVAFSMFRFV--GDPIENMLGQERTTEDVVRLRADLGLDQ 58

Query: 61  PLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVVGV 120
           P PVQY   ++     G+      +G+ V   ++   P TL L L +G L +V G+ +GV
Sbjct: 59  PFPVQYWRFLENA-AQGNFGLSYRQGRPVADILIERAPATLELALVSGTLAMVLGIGLGV 117

Query: 121 LAAMTRGRWLDRVLMILGLIGVSMPVFWLG---------EVANLVSQSRFHDTFLFSWVP 171
           L A+ R  WL   +M   LIGVS+P F +G         E+  L S  R     L  W  
Sbjct: 118 LTAIRRDGWLANTIMTASLIGVSLPTFLIGILLIYVFSVELGWLPSFGRGETVMLGQWST 177

Query: 172 ALGYKPFSEDPAGWFKTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSE 231
               K           +LV+P  TL    + L  R++R+ ++EVL+ D+IR ARA+GL E
Sbjct: 178 GFLTK-------SGLMSLVLPSITLGLYQMTLIMRLVRSEMLEVLRTDYIRFARARGLGE 230

Query: 232 RRILLRHGLRSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTI 291
           R +  RH L +++V  +T+ GL  G+++   A++ E VF   GVG +  +A+Q +D+P +
Sbjct: 231 RAVYFRHALVNTMVPVITIIGLQLGSII-AFAIITETVFQWPGVGLLFINAVQFVDIPVM 289

Query: 292 MATVIYASFFVVFANFIVDVLYAFLDPRVR 321
            A ++  S   V  N IVD+LY  +DPR+R
Sbjct: 290 AAYLMLISVLFVGINLIVDLLYFLIDPRLR 319