Pairwise Alignments

Query, 324 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

Subject, 305 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  174 bits (442), Expect = 2e-48
 Identities = 103/321 (32%), Positives = 172/321 (53%), Gaps = 18/321 (5%)

Query: 1   MLTALASRFAQMIFVLVGISMIVFLIFFATPGSDPAARIAGRNASQETLQVVRHDFGLDR 60
           ML  +  R A  + V V +S++ F +   +   D A  IAG  A+   ++ VR  FGLDR
Sbjct: 1   MLIYILRRLAIALCVAVTVSVVSFTLLHMS--GDLAVSIAGPEATAAQVESVRTQFGLDR 58

Query: 61  PLPVQYALMMKRLFITGDLTSFVNRGQKVVPTVVNAIPVTLSLVLGAGVLWVVGGVVVGV 120
           P+  QY   + R        SF  +G  V+  +   +P+T  L   A +L V+  + +GV
Sbjct: 59  PMATQYLDWLGRAVQLDFGKSFYFQGP-VMEMIAERLPITFKLGGSALLLAVLTAIPLGV 117

Query: 121 LAAMTRGRWLDRVLMILGLIGVSMPVFWLGEVANLVSQSRFHDTFLFSWVPALGYKPFSE 180
           LAA+ R  WLDR  +++ ++G +MP FW G    L+     H      W+P  G + +  
Sbjct: 118 LAAIYRDTWLDRAALLIAVVGQAMPSFWFGLTLILIFAVTLH------WLPVAGNESWQH 171

Query: 181 DPAGWFKTLVIPWFTLATLYVGLYGRVLRASLIEVLQEDFIRTARAKGLSERRILLRHGL 240
                    ++P   L    +    R+ R+ ++EVL  D+IRTARAKGLS+ R++ +H L
Sbjct: 172 --------FILPAVALGYYAMPAMMRLTRSGMLEVLGSDYIRTARAKGLSKSRVVFKHAL 223

Query: 241 RSSLVAFVTMFGLDFGALVGGGALLAEVVFGLQGVGKVTYDAMQNLDLPTIMATVIYASF 300
           R++++  V +  ++ G ++GG  ++ E V+ +QG+G++ +DA+   D P + A V+  + 
Sbjct: 224 RNAVIPVVALAAVELGFMLGGSVVI-ESVYSMQGLGQLAWDAISRNDYPVVQAVVLIIAM 282

Query: 301 FVVFANFIVDVLYAFLDPRVR 321
           F +   F+ DV+ A LDPR+R
Sbjct: 283 FYIGLTFLADVINALLDPRIR 303